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Yoann Boget

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3 papers

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AAAI Conference 2025 Conference Paper

GLAD: Improving Latent Graph Generative Modeling with Simple Quantization

Van Khoa Nguyen
Yoann Boget
Frantzeska Lavda
Alexandros Kalousis

Learning graph generative models over latent spaces has received less attention compared to models that operate on the original data space and has so far demonstrated lacklustre performance. We present GLAD a latent space graph generative model. Unlike most previous latent space graph generative models, GLAD operates on a discrete latent space that preserves to a significant extent the discrete nature of the graph structures making no unnatural assumptions such as latent space continuity. We learn the prior of our discrete latent space by adapting diffusion bridges to its structure. By operating over an appropriately constructed latent space we avoid relying on decompositions that are often used in models that operate in the original data space. We present experiments on a series of graph benchmark datasets that demonstrates GLAD as the first equivariant latent graph generative method achieves competitive performance with the state of the art baselines.

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ICML Conference 2025 Conference Paper

Simple and Critical Iterative Denoising: A Recasting of Discrete Diffusion in Graph Generation

Yoann Boget

Discrete Diffusion and Flow Matching models have significantly advanced generative modeling for discrete structures, including graphs. However, the dependencies of the noisy distributions across time of these models lead to error accumulation and propagation during the reverse denoising process—a phenomenon known as compounding denoising errors. To address this problem, we propose a novel framework called Simple Iterative Denoising, which simplifies discrete diffusion and circumvents the issue by removing dependencies on previous intermediate states in the noising process. Additionally, we enhance our model by incorporating a Critic, which during generation selectively retains or corrupts elements in an instance based on their likelihood under the data distribution. Our empirical evaluations demonstrate that the proposed method significantly outperforms existing discrete diffusion baselines in graph generation tasks.

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TMLR Journal 2024 Journal Article

Discrete Graph Auto-Encoder

Yoann Boget
Magda Gregorova
Alexandros Kalousis

Despite advances in generative methods, accurately modeling the distribution of graphs remains a challenging task primarily because of the absence of predefined or inherent unique graph representation. Two main strategies have emerged to tackle this issue: 1) restricting the number of possible representations by sorting the nodes, or 2) using permutation-invariant/equivariant functions, specifically Graph Neural Networks (GNNs). In this paper, we introduce a new framework named Discrete Graph Auto-Encoder (DGAE), which leverages the strengths of both strategies and mitigate their respective limitations. In essence, we propose a strategy in 2 steps. We first use a permutation-equivariant auto-encoder to convert graphs into sets of discrete latent node representations, each node being represented by a sequence of quantized vectors. In the second step, we sort the sets of discrete latent representations and learn their distribution with a specifically designed auto-regressive model based on the Transformer architecture. Through multiple experimental evaluations, we demonstrate the competitive performances of our model in comparison to the existing state-of-the-art across various datasets. Various ablation studies support the interest of our method.

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