Author name cluster

Wenhao Yu 0002

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7 papers

1 author row

ICLR Conference 2025 Conference Paper

BigCodeBench: Benchmarking Code Generation with Diverse Function Calls and Complex Instructions

Terry Yue Zhuo
Minh Chien Vu
Jenny Chim
Han Hu 0011
Wenhao Yu 0002
Ratnadira Widyasari
Imam Nur Bani Yusuf
Haolan Zhan

Task automation has been greatly empowered by the recent advances in Large Language Models (LLMs) via Python code, where the tasks range from software engineering development to general-purpose reasoning. While current benchmarks have shown that LLMs can solve tasks using programs like human developers, the majority of their evaluations are limited to short and self-contained algorithmic tasks or standalone function calls. Solving challenging and practical tasks requires the capability of utilizing **diverse function calls as tools** to efficiently implement functionalities like data analysis and web development. In addition, using multiple tools to solve a task needs compositional reasoning by accurately understanding **complex instructions**. Fulfilling both of these characteristics can pose a great challenge for LLMs. To assess how well LLMs can solve challenging and practical tasks via programs, we introduce BigCodeBench, a benchmark that challenges LLMs to invoke multiple function calls as tools from 139 libraries and 7 domains for 1,140 fine-grained tasks. To evaluate LLMs rigorously, each task encompasses 5.6 test cases with an average branch coverage of 99%. In addition, we propose a natural-language-oriented variant of BigCodeBench, BigCodeBench-Instruct, that automatically transforms the original docstrings into short instructions containing only essential information. Our extensive evaluation of 60 LLMs shows that **LLMs are not yet capable of following complex instructions to use function calls precisely, with scores up to 60%, significantly lower than the human performance of 97%**. The results underscore the need for further advancements in this area.

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ICLR Conference 2025 Conference Paper

DSBench: How Far Are Data Science Agents from Becoming Data Science Experts?

Liqiang Jing
Zhehui Huang
Xiaoyang Wang 0001
Wenlin Yao
Wenhao Yu 0002
Kaixin Ma
Hongming Zhang 0009
Xinya Du

Large Language Models (LLMs) and Large Vision-Language Models (LVLMs) have demonstrated impressive language/vision reasoning abilities, igniting the recent trend of building agents for targeted applications such as shopping assistants or AI software engineers. Recently, many data science benchmarks have been proposed to investigate their performance in the data science domain. However, existing data science benchmarks still fall short when compared to real-world data science applications due to their simplified settings. To bridge this gap, we introduce DSBench, a comprehensive benchmark designed to evaluate data science agents with realistic tasks. This benchmark includes 466 data analysis tasks and 74 data modeling tasks, sourced from Eloquence and Kaggle competitions. DSBench offers a realistic setting by encompassing long contexts, multimodal task backgrounds, reasoning with large data files and multi-table structures, and performing end-to-end data modeling tasks. Our evaluation of state-of-the-art LLMs, LVLMs, and agents shows that they struggle with most tasks, with the best agent solving only 34.12% of data analysis tasks and achieving a 34.74% Relative Performance Gap (RPG). These findings underscore the need for further advancements in developing more practical, intelligent, and autonomous data science agents.

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ICLR Conference 2025 Conference Paper

LongMemEval: Benchmarking Chat Assistants on Long-Term Interactive Memory

Di Wu 0054
Hongwei Wang
Wenhao Yu 0002
Yuwei Zhang 0001
Kai-Wei Chang 0001
Dong Yu 0001

Recent large language model (LLM)-driven chat assistant systems have integrated memory components to track user-assistant chat histories, enabling more accurate and personalized responses. However, their long-term memory capabilities in sustained interactions remain underexplored. We introduce LongMemEval, a comprehensive benchmark designed to evaluate five core long-term memory abilities of chat assistants: information extraction, multi-session reasoning, temporal reasoning, knowledge updates, and abstention. With 500 meticulously curated questions embedded within freely scalable user-assistant chat histories, LongMemEval presents a significant challenge to existing long-term memory systems, with commercial chat assistants and long-context LLMs showing a 30% accuracy drop on memorizing information across sustained interactions. We then present a unified framework that breaks down the long-term memory design into three stages: indexing, retrieval, and reading. Built upon key experimental insights, we propose several memory design optimizations including session decomposition for value granularity, fact-augmented key expansion for indexing, and time-aware query expansion for refining the search scope. Extensive experiments show that these optimizations greatly improve both memory recall and downstream question answering on LongMemEval. Overall, our study provides valuable resources and guidance for advancing the long-term memory capabilities of LLM-based chat assistants, paving the way toward more personalized and reliable conversational AI. Our benchmark and code are publicly available at https://github.com/xiaowu0162/LongMemEval.

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ICLR Conference 2025 Conference Paper

RepoGraph: Enhancing AI Software Engineering with Repository-level Code Graph

Siru Ouyang
Wenhao Yu 0002
Kaixin Ma
Zilin Xiao
Zhihan Zhang 0001
Mengzhao Jia
Jiawei Han 0001
Hongming Zhang 0009

Large Language Models (LLMs) excel in code generation yet struggle with modern AI software engineering tasks. Unlike traditional function-level or file-level coding tasks, AI software engineering requires not only basic coding proficiency but also advanced skills in managing and interacting with code repositories. However, existing methods often overlook the need for repository-level code understanding, which is crucial for accurately grasping the broader context and developing effective solutions. On this basis, we present RepoGraph, a plug-in module that manages a repository-level structure for modern AI software engineering solutions. RepoGraph offers the desired guidance and serves as a repository-wide navigation for AI software engineers. We evaluate RepoGraph on the SWE-bench by plugging it into four different methods of two lines of approaches, where RepoGraph substantially boosts the performance of all systems, leading to a new state-of-the-art among open-source frameworks. Our analyses also demonstrate the extensibility and flexibility of RepoGraph by testing on another repo-level coding benchmark, CrossCodeEval. Our code is available at https://github.com/ozyyshr/RepoGraph.

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ICLR Conference 2023 Conference Paper

Generate rather than Retrieve: Large Language Models are Strong Context Generators

Wenhao Yu 0002
Dan Iter
Shuohang Wang
Yichong Xu
Mingxuan Ju
Soumya Sanyal 0001
Chenguang Zhu 0001
Michael Zeng 0001

Knowledge-intensive tasks, such as open-domain question answering (QA), require access to a large amount of world or domain knowledge. A common approach for knowledge-intensive tasks is to employ a retrieve-then-read pipeline that first retrieves a handful of relevant contextual documents from an external corpus such as Wikipedia and then predicts an answer conditioned on the retrieved documents. In this paper, we present a novel perspective for solving knowledge-intensive tasks by replacing document retrievers with large language model generators. We call our method generate-then-read (GenRead), which first prompts a large language model to generate contextual documents based on a given question, and then reads the generated documents to produce the final answer. Furthermore, we propose a novel clustering-based prompting method that selects distinct prompts, in order to generate diverse documents that cover different perspectives, leading to better recall over acceptable answers. We conduct extensive experiments on three different knowledge-intensive tasks, including open-domain QA, fact checking, and dialogue system. Notably, GenRead achieves 71.6 and 54.4 exact match scores on TriviaQA and WebQ, significantly outperforming the state-of-the-art retrieve-then-read pipeline DPR-FiD by +4.0 and +3.9, without retrieving any documents from any external knowledge source. Lastly, we demonstrate the model performance can be further improved by combining retrieval and generation. Our code and generated documents can be found at https://github.com/wyu97/GenRead.

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ICLR Conference 2023 Conference Paper

Multi-task Self-supervised Graph Neural Networks Enable Stronger Task Generalization

Mingxuan Ju
Tong Zhao 0003
Qianlong Wen
Wenhao Yu 0002
Neil Shah
Yanfang Ye 0001
Chuxu Zhang

Self-supervised learning (SSL) for graph neural networks (GNNs) has attracted increasing attention from the graph machine learning community in recent years, owing to its capability to learn performant node embeddings without costly label information. One weakness of conventional SSL frameworks for GNNs is that they learn through a single philosophy, such as mutual information maximization or generative reconstruction. When applied to various downstream tasks, these frameworks rarely perform equally well for every task, because one philosophy may not span the extensive knowledge required for all tasks. To enhance the task generalization across tasks, as an important first step forward in exploring fundamental graph models, we introduce PARETOGNN, a multi-task SSL framework for node representation learning over graphs. Specifically, PARETOGNN is self-supervised by manifold pretext tasks observing multiple philosophies. To reconcile different philosophies, we explore a multiple-gradient descent algorithm, such that PARETOGNN actively learns from every pretext task while minimizing potential conflicts. We conduct comprehensive experiments over four downstream tasks (i.e., node classification, node clustering, link prediction, and partition prediction), and our proposal achieves the best overall performance across tasks on 11 widely adopted benchmark datasets. Besides, we observe that learning from multiple philosophies enhances not only the task generalization but also the single task performances, demonstrating that PARETOGNN achieves better task generalization via the disjoint yet complementary knowledge learned from different philosophies. Our code is publicly available at https://github.com/jumxglhf/ParetoGNN.

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ICML Conference 2022 Conference Paper

Learning from Counterfactual Links for Link Prediction

Tong Zhao 0003
Gang Liu 0025
Daheng Wang
Wenhao Yu 0002
Meng Jiang 0001

Learning to predict missing links is important for many graph-based applications. Existing methods were designed to learn the association between observed graph structure and existence of link between a pair of nodes. However, the causal relationship between the two variables was largely ignored for learning to predict links on a graph. In this work, we visit this factor by asking a counterfactual question: "would the link still exist if the graph structure became different from observation? " Its answer, counterfactual links, will be able to augment the graph data for representation learning. To create these links, we employ causal models that consider the information (i. e. , learned representations) of node pairs as context, global graph structural properties as treatment, and link existence as outcome. We propose a novel data augmentation-based link prediction method that creates counterfactual links and learns representations from both the observed and counterfactual links. Experiments on benchmark data show that our graph learning method achieves state-of-the-art performance on the task of link prediction.

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