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Tsung-Yi Ho

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25 papers
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25

AAAI Conference 2026 Conference Paper

KCLNet: Electrically Equivalence-Oriented Graph Representation Learning for Analog Circuits

  • Peng Xu
  • Yapeng Li
  • Tinghuan Chen
  • Tsung-Yi Ho
  • Bei Yu

Digital circuit representation learning has made remarkable progress in electronic design automation, effectively supporting critical tasks such as testability analysis and logic reasoning. However, representation learning for analog circuits remains challenging due to their continuous electrical characteristics compared to the discrete states of digital circuits. This paper presents a direct current (DC) electrically equivalent-oriented analog representation learning framework, named KCLNet. We will open-source the dataset and code upon publication. It comprises an asynchronous graph neural network structure with electrically-simulated message passing and a representation learning method inspired by Kirchhoff's Current Law (KCL). This method maintains the orderliness of the circuit embedding space by enforcing the equality of the sum of outgoing and incoming current embeddings at each node, which significantly enhances the generalization ability of circuit embeddings. KCLNet offers a novel and effective solution for analog circuit representation learning with electrical constraints preserved. Experimental results demonstrate that our method achieves significant performance in a variety of downstream tasks, e.g., analog circuit classification, subcircuit detection, and circuit edit distance prediction.

NeurIPS Conference 2025 Conference Paper

CARE: Decoding-Time Safety Alignment via Rollback and Introspection Intervention

  • Xiaomeng Hu
  • Fei Huang
  • Chenhan Yuan
  • Junyang Lin
  • Tsung-Yi Ho

As large language models (LLMs) are increasingly deployed in real-world applications, ensuring the safety of their outputs during decoding has become a critical challenge. However, existing decoding-time interventions, such as Contrastive Decoding, often force a severe trade-off between safety and response quality. In this work, we propose CARE, a novel framework for decoding-time safety alignment that integrates three key components: (1) a guard model for real-time safety monitoring, enabling detection of potentially unsafe content; (2) a rollback mechanism with a token buffer to correct unsafe outputs efficiently at an earlier stage without disrupting the user experience; and (3) a novel introspection-based intervention strategy, where the model generates self-reflective critiques of its previous outputs and incorporates these reflections into the context to guide subsequent decoding steps. The framework achieves a superior safety-quality trade-off by using its guard model for precise interventions, its rollback mechanism for timely corrections, and our novel introspection method for effective self-correction. Experimental results demonstrate that our framework achieves a superior balance of safety, quality, and efficiency, attaining a low harmful response rate and minimal disruption to the user experience while maintaining high response quality.

NeurIPS Conference 2025 Conference Paper

CoP: Agentic Red-teaming for Large Language Models using Composition of Principles

  • Chen Xiong
  • Pin-Yu Chen
  • Tsung-Yi Ho

Recent advances in Large Language Models (LLMs) have spurred transformative applications in various domains, ranging from open-source to proprietary LLMs. However, jailbreak attacks, which aim to break safety alignment and user compliance by tricking the target LLMs into answering harmful and risky responses, are becoming an urgent concern. The practice of red-teaming for LLMs is to proactively explore potential risks and error-prone instances before the release of frontier AI technology. This paper proposes an agentic workflow to automate and scale the red-teaming process of LLMs through the Composition-of-Principles (CoP) framework, where human users provide a set of red-teaming principles as instructions to an AI agent to automatically orchestrate effective red-teaming strategies and generate jailbreak prompts. Distinct from existing red-teaming methods, our CoP framework provides a unified and extensible framework to encompass and orchestrate human-provided red-teaming principles to enable the automated discovery of new red-teaming strategies. When tested against leading LLMs, CoP reveals unprecedented safety risks by finding novel jailbreak prompts and improving the best-known single-turn attack success rate by up to 19. 0 times.

NeurIPS Conference 2025 Conference Paper

PermLLM: Learnable Channel Permutation for N:M Sparse Large Language Models

  • Lancheng Zou
  • Shuo Yin
  • Zehua Pei
  • Tsung-Yi Ho
  • Farzan Farnia
  • Bei Yu

Channel permutation is a powerful technique for enhancing the accuracy of N: M sparse models by reordering the channels of weight matrices to prioritize the retention of important weights. However, traditional channel permutation methods rely on handcrafted quality metrics, which often fail to accurately capture the true impact of pruning on model performance. To address this limitation, we propose PermLLM, a novel post-training pruning framework that introduces learnable channel permutation (LCP) for N: M sparsity. LCP leverages Sinkhorn normalization to transform discrete permutation matrices into differentiable soft permutation matrices, enabling end-to-end optimization. Additionally, PermLLM incorporates an efficient block-wise channel permutation strategy, which significantly reduces the number of learnable parameters and computational complexity. PermLLM seamlessly integrates with existing one-shot pruning methods to adaptively optimize channel permutations, effectively mitigating pruning-induced errors. Extensive experiments on the LLaMA series, Qwen, and OPT models demonstrate that PermLLM achieves superior performance in optimizing N: M sparse models.

AAAI Conference 2025 Conference Paper

Retention Score: Quantifying Jailbreak Risks for Vision Language Models

  • Zaitang LI
  • Pin-Yu Chen
  • Tsung-Yi Ho

The emergence of Vision-Language Models (VLMs) is significant advancement in integrating computer vision with Large Language Models (LLMs) to enhance multi-modal machine learning capabilities. However, this progress has made VLMs vulnerable to advanced adversarial attacks, raising concerns about reliability. Objective of this paper is to assess resilience of VLMs against jailbreak attacks that can compromise model safety compliance and result in harmful outputs. To evaluate VLM's ability to maintain robustness against adversarial input perturbations, we propose novel metric called \textbf{Retention Score}. Retention Score is multi-modal evaluation metric that includes Retention-I and Retention-T scores for quantifying jailbreak risks in visual and textual components of VLMs. Our process involves generating synthetic image-text pairs using conditional diffusion model. These pairs are then predicted for toxicity score by VLM alongside toxicity judgment classifier. By calculating margin in toxicity scores, we can quantify robustness of VLM in attack-agnostic manner. Our work has four main contributions. First, we prove that Retention Score can serve as certified robustness metric. Second, we demonstrate that most VLMs with visual components are less robust against jailbreak attacks than corresponding plain VLMs. Additionally, we evaluate black-box VLM APIs and find that security settings in Google Gemini significantly affect score and robustness. Moreover, robustness of GPT4V is similar to medium settings of Gemini. Finally, our approach offers time-efficient alternative to existing adversarial attack methods and provides consistent model robustness rankings when evaluated on VLMs including MiniGPT-4, InstructBLIP, and LLaVA.

AAAI Conference 2025 Conference Paper

Token Highlighter: Inspecting and Mitigating Jailbreak Prompts for Large Language Models

  • Xiaomeng Hu
  • Pin-Yu Chen
  • Tsung-Yi Ho

Large Language Models (LLMs) are increasingly being integrated into services such as ChatGPT to provide responses to user queries. To mitigate potential harm and prevent misuse, there have been concerted efforts to align the LLMs with human values and legal compliance by incorporating various techniques, such as Reinforcement Learning from Human Feedback (RLHF), into the training of the LLMs. However, recent research has exposed that even aligned LLMs are susceptible to adversarial manipulations known as Jailbreak Attacks. To address this challenge, this paper proposes a method called Token Highlighter to inspect and mitigate the potential jailbreak threats in the user query. Token Highlighter introduced a concept called Affirmation Loss to measure the LLM's willingness to answer the user query. It then uses the gradient of Affirmation Loss for each token in the user query to locate the jailbreak-critical tokens. Further, Token Highlighter exploits our proposed Soft Removal technique to mitigate the jailbreak effects of critical tokens via shrinking their token embeddings. Experimental results on two aligned LLMs (LLaMA-2 and Vicuna-V1.5) demonstrate that the proposed method can effectively defend against a variety of Jailbreak Attacks while maintaining competent performance on benign questions of the AlpacaEval benchmark. In addition, Token Highlighter is a cost-effective and interpretable defense because it only needs to query the protected LLM once to compute the Affirmation Loss and can highlight the critical tokens upon refusal.

ICLR Conference 2024 Conference Paper

AutoVP: An Automated Visual Prompting Framework and Benchmark

  • Hsi-Ai Tsao
  • Lei Hsiung
  • Pin-Yu Chen
  • Si Liu 0001
  • Tsung-Yi Ho

Visual prompting (VP) is an emerging parameter-efficient fine-tuning approach to adapting pre-trained vision models to solve various downstream image-classification tasks. However, there has hitherto been little systematic study of the design space of VP and no clear benchmark for evaluating its performance. To bridge this gap, we propose AutoVP, an end-to-end expandable framework for automating VP design choices, along with 12 downstream image-classification tasks that can serve as a holistic VP-performance benchmark. Our design space covers 1) the joint optimization of the prompts; 2) the selection of pre-trained models, including image classifiers and text-image encoders; and 3) model output mapping strategies, including nonparametric and trainable label mapping. Our extensive experimental results show that AutoVP outperforms the best-known current VP methods by a substantial margin, having up to 6.7% improvement in accuracy; and attains a maximum performance increase of 27.5% compared to linear-probing (LP) baseline. AutoVP thus makes a two-fold contribution: serving both as an efficient tool for hyperparameter tuning on VP design choices, and as a comprehensive benchmark that can reasonably be expected to accelerate VP’s development. The source code is available at https://github.com/IBM/AutoVP.

ICML Conference 2024 Conference Paper

Be Your Own Neighborhood: Detecting Adversarial Examples by the Neighborhood Relations Built on Self-Supervised Learning

  • Zhiyuan He
  • Yijun Yang
  • Pin-Yu Chen
  • Qiang Xu 0001
  • Tsung-Yi Ho

Deep Neural Networks (DNNs) are vulnerable to Adversarial Examples (AEs), hindering their use in safety-critical systems. In this paper, we present BEYOND, an innovative AE detection framework designed for reliable predictions. BEYOND identifies AEs by distinguishing the AE’s abnormal relation with its augmented versions, i. e. neighbors, from two prospects: representation similarity and label consistency. An off-the-shelf Self-Supervised Learning (SSL) model is used to extract the representation and predict the label for its highly informative representation capacity compared to supervised learning models. We found clean samples maintain a high degree of representation similarity and label consistency relative to their neighbors, in contrast to AEs which exhibit significant discrepancies. We explain this observation and show that leveraging this discrepancy BEYOND can accurately detect AEs. Additionally, we develop a rigorous justification for the effectiveness of BEYOND. Furthermore, as a plug-and-play model, BEYOND can easily cooperate with the Adversarial Trained Classifier (ATC), achieving state-of-the-art (SOTA) robustness accuracy. Experimental results show that BEYOND outperforms baselines by a large margin, especially under adaptive attacks. Empowered by the robust relationship built on SSL, we found that BEYOND outperforms baselines in terms of both detection ability and speed. Project page: https: //huggingface. co/spaces/allenhzy/Be-Your-Own-Neighborhood.

AAAI Conference 2024 Conference Paper

Elijah: Eliminating Backdoors Injected in Diffusion Models via Distribution Shift

  • Shengwei An
  • Sheng-Yen Chou
  • Kaiyuan Zhang
  • Qiuling Xu
  • Guanhong Tao
  • Guangyu Shen
  • Siyuan Cheng
  • Shiqing Ma

Diffusion models (DM) have become state-of-the-art generative models because of their capability of generating high-quality images from noises without adversarial training. However, they are vulnerable to backdoor attacks as reported by recent studies. When a data input (e.g., some Gaussian noise) is stamped with a trigger (e.g., a white patch), the backdoored model always generates the target image (e.g., an improper photo). However, effective defense strategies to mitigate backdoors from DMs are underexplored. To bridge this gap, we propose the first backdoor detection and removal framework for DMs. We evaluate our framework Elijah on over hundreds of DMs of 3 types including DDPM, NCSN and LDM, with 13 samplers against 3 existing backdoor attacks. Extensive experiments show that our approach can have close to 100% detection accuracy and reduce the backdoor effects to close to zero without significantly sacrificing the model utility.

NeurIPS Conference 2024 Conference Paper

Gradient Cuff: Detecting Jailbreak Attacks on Large Language Models by Exploring Refusal Loss Landscapes

  • Xiaomeng Hu
  • Pin-Yu Chen
  • Tsung-Yi Ho

Large Language Models (LLMs) are becoming a prominent generative AI tool, where the user enters a query and the LLM generates an answer. To reduce harm and misuse, efforts have been made to align these LLMs to human values using advanced training techniques such as Reinforcement Learning from Human Feedback (RLHF). However, recent studies have highlighted the vulnerability of LLMs to adversarial jailbreak attempts aiming at subverting the embedded safety guardrails. To address this challenge, this paper defines and investigates the Refusal Loss of LLMs and then proposes a method called Gradient Cuff to detect jailbreak attempts. Gradient Cuff exploits the unique properties observed in the refusal loss landscape, including functional values and its smoothness, to design an effective two-step detection strategy. Experimental results on two aligned LLMs (LLaMA-2-7B-Chat and Vicuna-7B-V1. 5) and six types of jailbreak attacks (GCG, AutoDAN, PAIR, TAP, Base64, and LRL) show that Gradient Cuff can significantly improve the LLM's rejection capability for malicious jailbreak queries, while maintaining the model's performance for benign user queries by adjusting the detection threshold.

NeurIPS Conference 2024 Conference Paper

GREAT Score: Global Robustness Evaluation of Adversarial Perturbation using Generative Models

  • Zaitang LI
  • Pin-Yu Chen
  • Tsung-Yi Ho

Current studies on adversarial robustness mainly focus on aggregating \textit{local} robustness results from a set of data samples to evaluate and rank different models. However, the local statistics may not well represent the true \textit{global} robustness of the underlying unknown data distribution. To address this challenge, this paper makes the first attempt to present a new framework, called \textit{GREAT Score}, for global robustness evaluation of adversarial perturbation using generative models. Formally, GREAT Score carries the physical meaning of a global statistic capturing a mean certified attack-proof perturbation level over all samples drawn from a generative model. For finite-sample evaluation, we also derive a probabilistic guarantee on the sample complexity and the difference between the sample mean and the true mean. GREAT Score has several advantages: (1) Robustness evaluations using GREAT Score are efficient and scalable to large models, by sparing the need of running adversarial attacks. In particular, we show high correlation and significantly reduced computation cost of GREAT Score when compared to the attack-based model ranking on RobustBench \cite{croce2021robustbench}. (2) The use of generative models facilitates the approximation of the unknown data distribution. In our ablation study with different generative adversarial networks (GANs), we observe consistency between global robustness evaluation and the quality of GANs. (3) GREAT Score can be used for remote auditing of privacy-sensitive black-box models, as demonstrated by our robustness evaluation on several online facial recognition services.

TMLR Journal 2024 Journal Article

Neural Clamping: Joint Input Perturbation and Temperature Scaling for Neural Network Calibration

  • Yung-Chen Tang
  • Pin-Yu Chen
  • Tsung-Yi Ho

Neural network calibration is an essential task in deep learning to ensure consistency between the confidence of model prediction and the true correctness likelihood. In this paper, we propose a new post-processing calibration method called $\textbf{Neural Clamping}$, which employs a simple joint input-output transformation on a pre-trained classifier via a learnable universal input perturbation and an output temperature scaling parameter. Moreover, we provide theoretical explanations on why Neural Clamping is provably better than temperature scaling. Evaluated on BloodMNIST, CIFAR-100, and ImageNet image recognition datasets and a variety of deep neural network models, our empirical results show that Neural Clamping significantly outperforms state-of-the-art post-processing calibration methods. The code is available at github.com/yungchentang/NCToolkit, and the demo is available at huggingface.co/spaces/TrustSafeAI/NCTV.

NeurIPS Conference 2024 Conference Paper

NeuralFuse: Learning to Recover the Accuracy of Access-Limited Neural Network Inference in Low-Voltage Regimes

  • Hao-Lun Sun
  • Lei Hsiung
  • Nandhini Chandramoorthy
  • Pin-Yu Chen
  • Tsung-Yi Ho

Deep neural networks (DNNs) have become ubiquitous in machine learning, but their energy consumption remains problematically high. An effective strategy for reducing such consumption is supply-voltage reduction, but if done too aggressively, it can lead to accuracy degradation. This is due to random bit-flips in static random access memory (SRAM), where model parameters are stored. To address this challenge, we have developed NeuralFuse, a novel add-on module that handles the energy-accuracy tradeoff in low-voltage regimes by learning input transformations and using them to generate error-resistant data representations, thereby protecting DNN accuracy in both nominal and low-voltage scenarios. As well as being easy to implement, NeuralFuse can be readily applied to DNNs with limited access, such cloud-based APIs that are accessed remotely or non-configurable hardware. Our experimental results demonstrate that, at a 1% bit-error rate, NeuralFuse can reduce SRAM access energy by up to 24% while recovering accuracy by up to 57%. To the best of our knowledge, this is the first approach to addressing low-voltage-induced bit errors that requires no model retraining.

ICLR Conference 2024 Conference Paper

Rethinking Backdoor Attacks on Dataset Distillation: A Kernel Method Perspective

  • Ming-Yu Chung
  • Sheng-Yen Chou
  • Chia-Mu Yu
  • Pin-Yu Chen
  • Sy-Yen Kuo
  • Tsung-Yi Ho

Dataset distillation offers a potential means to enhance data efficiency in deep learning. Recent studies have shown its ability to counteract backdoor risks present in original training samples. In this study, we delve into the theoretical aspects of backdoor attacks and dataset distillation based on kernel methods. We introduce two new theory-driven trigger pattern generation methods specialized for dataset distillation. Following a comprehensive set of analyses and experiments, we show that our optimization-based trigger design framework informs effective backdoor attacks on dataset distillation. Notably, datasets poisoned by our designed trigger prove resilient against conventional backdoor attack detection and mitigation methods. Our empirical results validate that the triggers developed using our approaches are proficient at executing resilient backdoor attacks.

ICLR Conference 2024 Conference Paper

The Devil is in the Neurons: Interpreting and Mitigating Social Biases in Language Models

  • Yan Liu 0002
  • Yu Liu
  • Xiaokang Chen
  • Pin-Yu Chen
  • Daoguang Zan
  • Min-Yen Kan
  • Tsung-Yi Ho

Pre-trained Language models (PLMs) have been acknowledged to contain harmful information, such as social biases, which may cause negative social impacts or even bring catastrophic results in application. Previous works on this problem mainly focused on using black-box methods such as probing to detect and quantify social biases in PLMs by observing model outputs. As a result, previous debiasing methods mainly finetune or even pre-train PLMs on newly constructed anti-stereotypical datasets, which are high-cost. In this work, we try to unveil the mystery of social bias inside language models by introducing the concept of {\sc Social Bias Neurons}. Specifically, we propose {\sc Integrated Gap Gradients (IG$^2$)} to accurately pinpoint units (i.e., neurons) in a language model that can be attributed to undesirable behavior, such as social bias. By formalizing undesirable behavior as a distributional property of language, we employ sentiment-bearing prompts to elicit classes of sensitive words (demographics) correlated with such sentiments. Our IG$^2$ thus attributes the uneven distribution for different demographics to specific Social Bias Neurons, which track the trail of unwanted behavior inside PLM units to achieve interoperability. Moreover, derived from our interpretable technique, {\sc Bias Neuron Suppression (BNS)} is further proposed to mitigate social biases. By studying BERT, RoBERTa, and their attributable differences from debiased FairBERTa, IG$^2$ allows us to locate and suppress identified neurons, and further mitigate undesired behaviors. As measured by prior metrics from StereoSet, our model achieves a higher degree of fairness while maintaining language modeling ability with low cost\footnote{This work contains examples that potentially implicate stereotypes, associations, and other harms that could be offensive to individuals in certain social groups.}.

AAAI Conference 2023 System Paper

NCTV: Neural Clamping Toolkit and Visualization for Neural Network Calibration

  • Lei Hsiung
  • Yung-Chen Tang
  • Pin-Yu Chen
  • Tsung-Yi Ho

With the advancement of deep learning technology, neural networks have demonstrated their excellent ability to provide accurate predictions in many tasks. However, a lack of consideration for neural network calibration will not gain trust from humans, even for high-accuracy models. In this regard, the gap between the confidence of the model's predictions and the actual correctness likelihood must be bridged to derive a well-calibrated model. In this paper, we introduce the Neural Clamping Toolkit, the first open-source framework designed to help developers employ state-of-the-art model-agnostic calibrated models. Furthermore, we provide animations and interactive sections in the demonstration to familiarize researchers with calibration in neural networks. A Colab tutorial on utilizing our toolkit is also introduced.

NeurIPS Conference 2023 Conference Paper

RADAR: Robust AI-Text Detection via Adversarial Learning

  • Xiaomeng Hu
  • Pin-Yu Chen
  • Tsung-Yi Ho

Recent advances in large language models (LLMs) and the intensifying popularity of ChatGPT-like applications have blurred the boundary of high-quality text generation between humans and machines. However, in addition to the anticipated revolutionary changes to our technology and society, the difficulty of distinguishing LLM-generated texts (AI-text) from human-generated texts poses new challenges of misuse and fairness, such as fake content generation, plagiarism, and false accusations of innocent writers. While existing works show that current AI-text detectors are not robust to LLM-based paraphrasing, this paper aims to bridge this gap by proposing a new framework called RADAR, which jointly trains a $\underline{r}$obust $\underline{A}$I-text $\underline{d}$etector via $\underline{a}$dversarial lea$\underline{r}$ning. RADAR is based on adversarial training of a paraphraser and a detector. The paraphraser's goal is to generate realistic content to evade AI-text detection. RADAR uses the feedback from the detector to update the paraphraser, and vice versa. Evaluated with 8 different LLMs (Pythia, Dolly 2. 0, Palmyra, Camel, GPT-J, Dolly 1. 0, LLaMA, and Vicuna) across 4 datasets, experimental results show that RADAR significantly outperforms existing AI-text detection methods, especially when paraphrasing is in place. We also identify the strong transferability of RADAR from instruction-tuned LLMs to other LLMs, and evaluate the improved capability of RADAR via GPT-3. 5-Turbo.

NeurIPS Conference 2023 Conference Paper

Uncovering and Quantifying Social Biases in Code Generation

  • Yan Liu
  • Xiaokang Chen
  • Yan Gao
  • Zhe Su
  • Fengji Zhang
  • Daoguang Zan
  • Jian-Guang Lou
  • Pin-Yu Chen

With the popularity of automatic code generation tools, such as Copilot, the study of the potential hazards of these tools is gaining importance. In this work, we explore the social bias problem in pre-trained code generation models. We propose a new paradigm to construct code prompts and successfully uncover social biases in code generation models. To quantify the severity of social biases in generated code, we develop a dataset along with three metrics to evaluate the overall social bias and fine-grained unfairness across different demographics. Experimental results on three pre-trained code generation models (Codex, InCoder, and CodeGen) with varying sizes, reveal severe social biases. Moreover, we conduct analysis to provide useful insights for further choice of code generation models with low social bias.

NeurIPS Conference 2023 Conference Paper

VillanDiffusion: A Unified Backdoor Attack Framework for Diffusion Models

  • Sheng-Yen Chou
  • Pin-Yu Chen
  • Tsung-Yi Ho

Diffusion Models (DMs) are state-of-the-art generative models that learn a reversible corruption process from iterative noise addition and denoising. They are the backbone of many generative AI applications, such as text-to-image conditional generation. However, recent studies have shown that basic unconditional DMs (e. g. , DDPM and DDIM) are vulnerable to backdoor injection, a type of output manipulation attack triggered by a maliciously embedded pattern at model input. This paper presents a unified backdoor attack framework (VillanDiffusion) to expand the current scope of backdoor analysis for DMs. Our framework covers mainstream unconditional and conditional DMs (denoising-based and score-based) and various training-free samplers for holistic evaluations. Experiments show that our unified framework facilitates the backdoor analysis of different DM configurations and provides new insights into caption-based backdoor attacks on DMs.

IJCAI Conference 2022 Conference Paper

CARBEN: Composite Adversarial Robustness Benchmark

  • Lei Hsiung
  • Yun-Yun Tsai
  • Pin-Yu Chen
  • Tsung-Yi Ho

Prior literature on adversarial attack methods has mainly focused on attacking with and defending against a single threat model, e. g. , perturbations bounded in Lp ball. However, multiple threat models can be combined into composite perturbations. One such approach, composite adversarial attack (CAA), not only expands the perturbable space of the image, but also may be overlooked by current modes of robustness evaluation. This paper demonstrates how CAA's attack order affects the resulting image, and provides real-time inferences of different models, which will facilitate users' configuration of the parameters of the attack level and their rapid evaluation of model prediction. A leaderboard to benchmark adversarial robustness against CAA is also introduced.

ICML Conference 2021 Conference Paper

Parallel Droplet Control in MEDA Biochips using Multi-Agent Reinforcement Learning

  • Tung-Che Liang
  • Jin Zhou 0014
  • Yun-Sheng Chan
  • Tsung-Yi Ho
  • Krishnendu Chakrabarty
  • Cy Lee

Microfluidic biochips are being utilized for clinical diagnostics, including COVID-19 testing, because of they provide sample-to-result turnaround at low cost. Recently, microelectrode-dot-array (MEDA) biochips have been proposed to advance microfluidics technology. A MEDA biochip manipulates droplets of nano/picoliter volumes to automatically execute biochemical protocols. During bioassay execution, droplets are transported in parallel to achieve high-throughput outcomes. However, a major concern associated with the use of MEDA biochips is microelectrode degradation over time. Recent work has shown that formulating droplet transportation as a reinforcement-learning (RL) problem enables the training of policies to capture the underlying health conditions of microelectrodes and ensure reliable fluidic operations. However, the above RL-based approach suffers from two key limitations: 1) it cannot be used for concurrent transportation of multiple droplets; 2) it requires the availability of CCD cameras for monitoring droplet movement. To overcome these problems, we present a multi-agent reinforcement learning (MARL) droplet-routing solution that can be used for various sizes of MEDA biochips with integrated sensors, and we demonstrate the reliable execution of a serial-dilution bioassay with the MARL droplet router on a fabricated MEDA biochip. To facilitate further research, we also present a simulation environment based on the PettingZoo Gym Interface for MARL-guided droplet-routing problems on MEDA biochips.

ICML Conference 2020 Conference Paper

Adaptive Droplet Routing in Digital Microfluidic Biochips Using Deep Reinforcement Learning

  • Tung-Che Liang
  • Zhanwei Zhong
  • Yaas Bigdeli
  • Tsung-Yi Ho
  • Krishnendu Chakrabarty
  • Richard B. Fair

We present and investigate a novel application domain for deep reinforcement learning (RL): droplet routing on digital microfluidic biochips (DMFBs). A DMFB, composed of a two-dimensional electrode array, manipulates discrete fluid droplets to automatically execute biochemical protocols such as point-of-care clinical diagnosis. However, a major concern associated with the use of DMFBs is that electrodes in a biochip can degrade over time. Droplet-transportation operations associated with the degraded electrodes can fail, thereby compromising the integrity of the bioassay outcome. We show that casting droplet transportation as an RL problem enables the training of deep network policies to capture the underlying health conditions of electrodes and to provide reliable fluidic operations. We propose a new RL-based droplet-routing flow that can be used for various sizes of DMFBs, and demonstrate reliable execution of an epigenetic bioassay with the RL droplet router on a fabricated DMFB. To facilitate further research, we also present a simulation environment based on the OpenAI Gym Interface for RL-guided droplet-routing problems on DMFBs.

AAAI Conference 2020 Conference Paper

Beyond Digital Domain: Fooling Deep Learning Based Recognition System in Physical World

  • Kaichen Yang
  • Tzungyu Tsai
  • Honggang Yu
  • Tsung-Yi Ho
  • Yier Jin

Adversarial examples that can fool deep neural network (DNN) models in computer vision present a growing threat. The current methods of launching adversarial attacks concentrate on attacking image classifiers by adding noise to digital inputs. The problem of attacking object detection models and adversarial attacks in physical world are rarely touched. Some prior works are proposed to launch physical adversarial attack against object detection models, but limited by certain aspects. In this paper, we propose a novel physical adversarial attack targeting object detection models. Instead of simply printing images, we manufacture real metal objects that could achieve the adversarial effect. In both indoor and outdoor experiments we show our physical adversarial objects can fool widely applied object detection models including SSD, YOLO and Faster R-CNN in various environments. We also test our attack in a variety of commercial platforms for object detection and demonstrate that our attack is still valid on these platforms. Consider the potential defense mechanisms our adversarial objects may encounter, we conduct a series of experiments to evaluate the effect of existing defense methods on our physical attack.

AAAI Conference 2020 Conference Paper

Robust Adversarial Objects against Deep Learning Models

  • Tzungyu Tsai
  • Kaichen Yang
  • Tsung-Yi Ho
  • Yier Jin

Previous work has shown that Deep Neural Networks (DNNs), including those currently in use in many fields, are extremely vulnerable to maliciously crafted inputs, known as adversarial examples. Despite extensive and thorough research of adversarial examples in many areas, adversarial 3D data, such as point clouds, remain comparatively unexplored. The study of adversarial 3D data is crucial considering its impact in real-life, high-stakes scenarios including autonomous driving. In this paper, we propose a novel adversarial attack against PointNet++, a deep neural network that performs classification and segmentation tasks using features learned directly from raw 3D points. In comparison to existing works, our attack generates not only adversarial point clouds, but also robust adversarial objects that in turn generate adversarial point clouds when sampled both in simulation and after construction in real world. We also demonstrate that our objects can bypass existing defense mechanisms designed especially against adversarial 3D data.

ICML Conference 2020 Conference Paper

Transfer Learning without Knowing: Reprogramming Black-box Machine Learning Models with Scarce Data and Limited Resources

  • Yun-Yun Tsai
  • Pin-Yu Chen
  • Tsung-Yi Ho

Current transfer learning methods are mainly based on finetuning a pretrained model with target-domain data. Motivated by the techniques from adversarial machine learning (ML) that are capable of manipulating the model prediction via data perturbations, in this paper we propose a novel approach, black-box adversarial reprogramming (BAR), that repurposes a well-trained black-box ML model (e. g. , a prediction API or a proprietary software) for solving different ML tasks, especially in the scenario with scarce data and constrained resources. The rationale lies in exploiting high-performance but unknown ML models to gain learning capability for transfer learning. Using zeroth order optimization and multi-label mapping techniques, BAR can reprogram a black-box ML model solely based on its input-output responses without knowing the model architecture or changing any parameter. More importantly, in the limited medical data setting, on autism spectrum disorder classification, diabetic retinopathy detection, and melanoma detection tasks, BAR outperforms state-of-the-art methods and yields comparable performance to the vanilla adversarial reprogramming method requiring complete knowledge of the target ML model. BAR also outperforms baseline transfer learning approaches by a significant margin, demonstrating cost-effective means and new insights for transfer learning.

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