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Thomas R. Henry

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3 papers
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3

JBHI Journal 2025 Journal Article

Pseudo-HFOs Elimination in iEEG Recordings Using a Robust Residual-Based Dictionary Learning Framework

  • Behrang Fazli Besheli
  • Zhiyi Sha
  • Amir Hossein Ayyoubi
  • Chandra Prakash Swamy
  • Thomas R. Henry
  • Gregory A. Worrell
  • Kai J. Miller
  • Jonathon J. Parker

High-frequency oscillations (HFOs) in intracranial EEG (iEEG) recordings are critical biomarkers for localizing the seizure onset zone (SOZ) in patients with focal refractory epilepsy. Despite their clinical significance, HFO analysis is often compromised by high-frequency artifacts that bypass conventional detectors, resulting in false-positive events that dilute the reliability of the HFO pool. To address this challenge, this study aimed to develop an automated method to accurately identify and eliminate false-positive events, ensuring more robust and artifact-free HFO analysis for clinical applications. Using iEEG data from 15 patients with focal epilepsy, we implemented an attention-based cascaded residual dictionary learning framework coupled with a random forest classifier. Events passing an initial amplitude detector underwent a second-stage refinement to remove artifacts and non-neural noise that mimicked HFOs. This was achieved by evaluating event reconstruction quality using a dictionary learned from genuine HFOs. Compared to visual assessments by three human experts, the proposed method demonstrated 92. 14% classification accuracy in distinguishing real HFOs from pseudo-HFOs. Additionally, the method improved SOZ localization accuracy in noisy iEEG data by 20% (p=6e-5) and in clean iEEG data by 4% (p=3. 3e-3). The learned dictionary effectively captured raw HFO morphology in shallow layers, while deeper layers identified ripple and fast ripple components, all without human supervision. These findings highlight the algorithm's effectiveness in detecting pseudo-HFOs in corrupted iEEG data, thereby enhancing the clinical utility of HFOs as biomarkers for SOZ in epilepsy.

YNICL Journal 2015 Journal Article

Thalamocortical relationship in epileptic patients with generalized spike and wave discharges — A multimodal neuroimaging study

  • Clara Huishi Zhang
  • Zhiyi Sha
  • John Mundahl
  • Sa Liu
  • Yunfeng Lu
  • Thomas R. Henry
  • Bin He

Unlike focal or partial epilepsy, which has a confined range of influence, idiopathic generalized epilepsy (IGE) often affects the whole or a larger portion of the brain without obvious, known cause. It is important to understand the underlying network which generates epileptic activity and through which epileptic activity propagates. The aim of the present study was to investigate the thalamocortical relationship using non-invasive imaging modalities in a group of IGE patients. We specifically investigated the roles of the mediodorsal nuclei in the thalami and the medial frontal cortex in generating and spreading IGE activities. We hypothesized that the connectivity between these two structures is key in understanding the generation and propagation of epileptic activity in brains affected by IGE. Using three imaging techniques of EEG, fMRI and EEG-informed fMRI, we identified important players in generation and propagation of generalized spike-and-wave discharges (GSWDs). EEG-informed fMRI suggested multiple regions including the medial frontal area near to the anterior cingulate cortex, mediodorsal nuclei of the thalamus, caudate nucleus among others that related to the GSWDs. The subsequent seed-based fMRI analysis revealed a reciprocal cortical and bi-thalamic functional connection. Through EEG-based Granger Causality analysis using (DTF) and adaptive DTF, within the reciprocal thalamocortical circuitry, thalamus seems to serve as a stronger source in driving cortical activity from initiation to the propagation of a GSWD. Such connectivity change starts before the GSWDs and continues till the end of the slow wave discharge. Thalamus, especially the mediodorsal nuclei, may serve as potential targets for deep brain stimulation to provide more effective treatment options for patients with drug-resistant generalized epilepsy.