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Siddharth N

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6 papers

2 author rows

TMLR Journal 2026 Journal Article

AIMing for Standardised Explainability Evaluation in GNNs: A Framework and Case Study on Graph Kernel Networks

Magdalena Proszewska
Siddharth N

Graph Neural Networks (GNNs) have advanced significantly in handling graph-structured data, but a comprehensive framework for evaluating explainability remains lacking. Existing evaluation frameworks primarily involve post-hoc explanations, and operate in the setting where multiple methods generate a suite of explanations for a single model. This makes comparison of explanations across models difficult. Evaluation of inherently interpretable models often targets a specific aspect of interpretability relevant to the model, but remains underdeveloped in terms of generating insight across a suite of measures. We introduce AIM, a comprehensive framework that addresses these limitations by measuring Accuracy, Instance-level explanations, and Model-level explanations. AIM is formulated with minimal constraints to enhance flexibility and facilitate broad applicability. Here, we use AIM in a pipeline, extracting explanations from inherently interpretable GNNs such as graph kernel networks (GKNs) and prototype networks (PNs), evaluating these explanations with AIM, identifying their limitations and obtaining insights to their characteristics. Taking GKNs as a case study, we show how the insights obtained from AIM can be used to develop an updated model, xGKN, that maintains high accuracy while demonstrating improved explainability. Our approach aims to advance the field of Explainable AI (XAI) for GNNs, providing more robust and practical solutions for understanding and improving complex models.

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NeurIPS Conference 2022 Conference Paper

Drawing out of Distribution with Neuro-Symbolic Generative Models

Yichao Liang
Josh Tenenbaum
Tuan Anh Le
Siddharth N

Learning general-purpose representations from perceptual inputs is a hallmark of human intelligence. For example, people can write out numbers or characters, or even draw doodles, by characterizing these tasks as different instantiations of the same generic underlying process---compositional arrangements of different forms of pen strokes. Crucially, learning to do one task, say writing, implies reasonable competence at another, say drawing, on account of this shared process. We present Drawing out of Distribution (DooD), a neuro-symbolic generative model of stroke-based drawing that can learn such general-purpose representations. In contrast to prior work, DooD operates directly on images, requires no supervision or expensive test-time inference, and performs unsupervised amortized inference with a symbolic stroke model that better enables both interpretability and generalization. We evaluate DooD on its ability to generalize across both data and tasks. We first perform zero-shot transfer from one dataset (e. g. MNIST) to another (e. g. Quickdraw), across five different datasets, and show that DooD clearly outperforms different baselines. An analysis of the learnt representations further highlights the benefits of adopting a symbolic stroke model. We then adopt a subset of the Omniglot challenge tasks, and evaluate its ability to generate new exemplars (both unconditionally and conditionally), and perform one-shot classification, showing that DooD matches the state of the art. Taken together, we demonstrate that DooD does indeed capture general-purpose representations across both data and task, and takes a further step towards building general and robust concept-learning systems.

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ICLR Conference 2022 Conference Paper

On Incorporating Inductive Biases into VAEs

Ning Miao
Emile Mathieu
Siddharth N
Yee Whye Teh
Tom Rainforth

We explain why directly changing the prior can be a surprisingly ineffective mechanism for incorporating inductive biases into variational auto-encoders (VAEs), and introduce a simple and effective alternative approach: Intermediary Latent Space VAEs (InteL-VAEs). InteL-VAEs use an intermediary set of latent variables to control the stochasticity of the encoding process, before mapping these in turn to the latent representation using a parametric function that encapsulates our desired inductive bias(es). This allows us to impose properties like sparsity or clustering on learned representations, and incorporate human knowledge into the generative model. Whereas changing the prior only indirectly encourages behavior through regularizing the encoder, InteL-VAEs are able to directly enforce desired characteristics. Moreover, they bypass the computation and encoder design issues caused by non-Gaussian priors, while allowing for additional flexibility through training of the parametric mapping function. We show that these advantages, in turn, lead to both better generative models and better representations being learned.

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NeurIPS Conference 2019 Conference Paper

Variational Mixture-of-Experts Autoencoders for Multi-Modal Deep Generative Models

Yuge Shi
Siddharth N
Brooks Paige
Philip Torr

Learning generative models that span multiple data modalities, such as vision and language, is often motivated by the desire to learn more useful, generalisable representations that faithfully capture common underlying factors between the modalities. In this work, we characterise successful learning of such models as the fulfilment of four criteria: i) implicit latent decomposition into shared and private subspaces, ii) coherent joint generation over all modalities, iii) coherent cross-generation across individual modalities, and iv) improved model learning for individual modalities through multi-modal integration. Here, we propose a mixture-of-experts multi-modal variational autoencoder (MMVAE) for learning of generative models on different sets of modalities, including a challenging image language dataset, and demonstrate its ability to satisfy all four criteria, both qualitatively and quantitatively.

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NeurIPS Conference 2018 Conference Paper

Faithful Inversion of Generative Models for Effective Amortized Inference

Stefan Webb
Adam Golinski
Rob Zinkov
Siddharth N
Tom Rainforth
Yee Whye Teh
Frank Wood

Inference amortization methods share information across multiple posterior-inference problems, allowing each to be carried out more efficiently. Generally, they require the inversion of the dependency structure in the generative model, as the modeller must learn a mapping from observations to distributions approximating the posterior. Previous approaches have involved inverting the dependency structure in a heuristic way that fails to capture these dependencies correctly, thereby limiting the achievable accuracy of the resulting approximations. We introduce an algorithm for faithfully, and minimally, inverting the graphical model structure of any generative model. Such inverses have two crucial properties: (a) they do not encode any independence assertions that are absent from the model and; (b) they are local maxima for the number of true independencies encoded. We prove the correctness of our approach and empirically show that the resulting minimally faithful inverses lead to better inference amortization than existing heuristic approaches.

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NeurIPS Conference 2017 Conference Paper

Learning Disentangled Representations with Semi-Supervised Deep Generative Models

Siddharth N
Brooks Paige
Jan-Willem van de Meent
Alban Desmaison
Noah Goodman
Pushmeet Kohli
Frank Wood
Philip Torr

Variational autoencoders (VAEs) learn representations of data by jointly training a probabilistic encoder and decoder network. Typically these models encode all features of the data into a single variable. Here we are interested in learning disentangled representations that encode distinct aspects of the data into separate variables. We propose to learn such representations using model architectures that generalise from standard VAEs, employing a general graphical model structure in the encoder and decoder. This allows us to train partially-specified models that make relatively strong assumptions about a subset of interpretable variables and rely on the flexibility of neural networks to learn representations for the remaining variables. We further define a general objective for semi-supervised learning in this model class, which can be approximated using an importance sampling procedure. We evaluate our framework's ability to learn disentangled representations, both by qualitative exploration of its generative capacity, and quantitative evaluation of its discriminative ability on a variety of models and datasets.

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