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Pascal Weber

Possible papers associated with this exact author name in Arrow. This page groups case-insensitive exact name matches and is not a full identity disambiguation profile.

2 papers
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2

NeurIPS Conference 2025 Conference Paper

Ultrametric Cluster Hierarchies: I Want ‘em All!

  • Andrew Draganov
  • Pascal Weber
  • Rasmus Jørgensen
  • Anna Beer
  • Claudia Plant
  • Ira Assent

Hierarchical clustering is a powerful tool for exploratory data analysis, organizing data into a tree of clusterings from which a partition can be chosen. This paper generalizes these ideas by proving that, for any reasonable hierarchy, one can optimally solve any center-based clustering objective over it (such as $k$-means). Moreover, these solutions can be found exceedingly quickly and are *themselves* necessarily hierarchical. Thus, given a cluster tree, we show that one can quickly access a plethora of new, equally meaningful hierarchies. Just as in standard hierarchical clustering, one can then choose any desired partition from these new hierarchies. We conclude by verifying the utility of our proposed techniques across datasets, hierarchies, and partitioning schemes.

I&C Journal 2022 Journal Article

Edge minimization in de Bruijn graphs

  • Uwe Baier
  • Thomas Büchler
  • Enno Ohlebusch
  • Pascal Weber

This paper introduces the de Bruijn graph edge minimization problem, which is related to the compression of de Bruijn graphs: find the order-k de Bruijn graph with minimum edge count among all orders. We describe an efficient algorithm that solves this problem. Since the edge minimization problem is connected to the BWT compression technique called “tunneling”, the paper also describes a way to minimize the length of a tunneled BWT in such a way that useful properties for sequence analysis are preserved. Thus, it provides significant progress towards a solution to the open problem of finding optimal disjoint blocks that minimize space, as stated in Alanko et al. (DCC 2019).

v2026.09.13