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Michael A. Osborne

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29 papers
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29

NeurIPS Conference 2024 Conference Paper

Bayesian Optimisation with Unknown Hyperparameters: Regret Bounds Logarithmically Closer to Optimal

  • Juliusz Ziomek
  • Masaki Adachi
  • Michael A. Osborne

Bayesian Optimization (BO) is widely used for optimising black-box functions but requires us to specify the length scale hyperparameter, which defines the smoothness of the functions the optimizer will consider. Most current BO algorithms choose this hyperparameter by maximizing the marginal likelihood of the observed data, albeit risking misspecification if the objective function is less smooth in regions we have not yet explored. The only prior solution addressing this problem with theoretical guarantees was A-GP-UCB, proposed by Berkenkamp et al. (2019). This algorithm progressively decreases the length scale, expanding the class of functions considered by the optimizer. However, A-GP-UCB lacks a stopping mechanism, leading to over-exploration and slow convergence. To overcome this, we introduce Length scale Balancing (LB) - a novel approach, aggregating multiple base surrogate models with varying length scales. LB intermittently adds smaller length scale candidate values while retaining longer scales, balancing exploration and exploitation. We formally derive a cumulative regret bound of LB and compare it with the regret of an oracle BO algorithm using the optimal length scale. Denoting the factor by which the regret bound of A-GP-UCB was away from oracle as $g(T)$, we show that LB is only $\log g(T)$ away from oracle regret. We also empirically evaluate our algorithm on synthetic and real-world benchmarks and show it outperforms A-GP-UCB and maximum likelihood estimation.

ICML Conference 2024 Conference Paper

Position: Bayesian Deep Learning is Needed in the Age of Large-Scale AI

  • Theodore Papamarkou
  • Maria Skoularidou
  • Konstantina Palla
  • Laurence Aitchison
  • Julyan Arbel
  • David B. Dunson
  • Maurizio Filippone
  • Vincent Fortuin

In the current landscape of deep learning research, there is a predominant emphasis on achieving high predictive accuracy in supervised tasks involving large image and language datasets. However, a broader perspective reveals a multitude of overlooked metrics, tasks, and data types, such as uncertainty, active and continual learning, and scientific data, that demand attention. Bayesian deep learning (BDL) constitutes a promising avenue, offering advantages across these diverse settings. This paper posits that BDL can elevate the capabilities of deep learning. It revisits the strengths of BDL, acknowledges existing challenges, and highlights some exciting research avenues aimed at addressing these obstacles. Looking ahead, the discussion focuses on possible ways to combine large-scale foundation models with BDL to unlock their full potential.

NeurIPS Conference 2024 Conference Paper

Principled Bayesian Optimization in Collaboration with Human Experts

  • Wenjie Xu
  • Masaki Adachi
  • Colin N. Jones
  • Michael A. Osborne

Bayesian optimisation for real-world problems is often performed interactively with human experts, and integrating their domain knowledge is key to accelerate the optimisation process. We consider a setup where experts provide advice on the next query point through binary accept/reject recommendations (labels). Experts’ labels are often costly, requiring efficient use of their efforts, and can at the same time be unreliable, requiring careful adjustment of the degree to which any expert is trusted. We introduce the first principled approach that provides two key guarantees. (1) Handover guarantee: similar to a no-regret property, we establish a sublinear bound on the cumulative number of experts’ binary labels. Initially, multiple labels per query are needed, but the number of expert labels required asymptotically converges to zero, saving both expert effort and computation time. (2) No-harm guarantee with data-driven trust level adjustment: our adaptive trust level ensures that the convergence rate will not be worse than the one without using advice, even if the advice from experts is adversarial. Unlike existing methods that employ a user-defined function that hand-tunes the trust level adjustment, our approach enables data-driven adjustments. Real-world applications empirically demonstrate that our method not only outperforms existing baselines, but also maintains robustness despite varying labelling accuracy, in tasks of battery design with human experts.

UAI Conference 2024 Conference Paper

Walking the Values in Bayesian Inverse Reinforcement Learning

  • Ondrej Bajgar
  • Alessandro Abate
  • Konstantinos Gatsis
  • Michael A. Osborne

The goal of Bayesian inverse reinforcement learning (IRL) is recovering a posterior distribution over reward functions using a set of demonstrations from an expert optimizing for a reward unknown to the learner. The resulting posterior over rewards can then be used to synthesize an apprentice policy that performs well on the same or a similar task. A key challenge in Bayesian IRL is bridging the computational gap between the hypothesis space of possible rewards and the likelihood, often defined in terms of Q values: vanilla Bayesian IRL needs to solve the costly forward planning problem – going from rewards to the Q values – at every step of the algorithm, which may need to be done thousands of times. We propose to solve this by a simple change: instead of focusing on primarily sampling in the space of rewards, we can focus on primarily working in the space of Q-values, since the computation required to go from Q-values to reward is radically cheaper. Furthermore, this reversion of the computation makes it easy to compute the gradient allowing efficient sampling using Hamiltonian Monte Carlo. We propose ValueWalk – a new Markov chain Monte Carlo method based on this insight – and illustrate its advantages on several tasks.

ICLR Conference 2022 Conference Paper

Revisiting Design Choices in Offline Model Based Reinforcement Learning

  • Cong Lu
  • Philip J. Ball
  • Jack Parker-Holder
  • Michael A. Osborne
  • Stephen J. Roberts

Offline reinforcement learning enables agents to leverage large pre-collected datasets of environment transitions to learn control policies, circumventing the need for potentially expensive or unsafe online data collection. Significant progress has been made recently in offline model-based reinforcement learning, approaches which leverage a learned dynamics model. This typically involves constructing a probabilistic model, and using the model uncertainty to penalize rewards where there is insufficient data, solving for a pessimistic MDP that lower bounds the true MDP. Existing methods, however, exhibit a breakdown between theory and practice, whereby pessimistic return ought to be bounded by the total variation distance of the model from the true dynamics, but is instead implemented through a penalty based on estimated model uncertainty. This has spawned a variety of uncertainty heuristics, with little to no comparison between differing approaches. In this paper, we compare these heuristics, and design novel protocols to investigate their interaction with other hyperparameters, such as the number of models, or imaginary rollout horizon. Using these insights, we show that selecting these key hyperparameters using Bayesian Optimization produces superior configurations that are vastly different to those currently used in existing hand-tuned state-of-the-art methods, and result in drastically stronger performance.

ICML Conference 2022 Conference Paper

Robust Multi-Objective Bayesian Optimization Under Input Noise

  • Samuel Daulton
  • Sait Cakmak
  • Maximilian Balandat
  • Michael A. Osborne
  • Enlu Zhou
  • Eytan Bakshy

Bayesian optimization (BO) is a sample-efficient approach for tuning design parameters to optimize expensive-to-evaluate, black-box performance metrics. In many manufacturing processes, the design parameters are subject to random input noise, resulting in a product that is often less performant than expected. Although BO methods have been proposed for optimizing a single objective under input noise, no existing method addresses the practical scenario where there are multiple objectives that are sensitive to input perturbations. In this work, we propose the first multi-objective BO method that is robust to input noise. We formalize our goal as optimizing the multivariate value-at-risk (MVaR), a risk measure of the uncertain objectives. Since directly optimizing MVaR is computationally infeasible in many settings, we propose a scalable, theoretically-grounded approach for optimizing MVaR using random scalarizations. Empirically, we find that our approach significantly outperforms alternative methods and efficiently identifies optimal robust designs that will satisfy specifications across multiple metrics with high probability.

JMLR Journal 2022 Journal Article

Universal Approximation of Functions on Sets

  • Edward Wagstaff
  • Fabian B. Fuchs
  • Martin Engelcke
  • Michael A. Osborne
  • Ingmar Posner

Modelling functions of sets, or equivalently, permutation-invariant functions, is a long-standing challenge in machine learning. Deep Sets is a popular method which is known to be a universal approximator for continuous set functions. We provide a theoretical analysis of Deep Sets which shows that this universal approximation property is only guaranteed if the model's latent space is sufficiently high-dimensional. If the latent space is even one dimension lower than necessary, there exist piecewise-affine functions for which Deep Sets performs no better than a naïve constant baseline, as judged by worst-case error. Deep Sets may be viewed as the most efficient incarnation of the Janossy pooling paradigm. We identify this paradigm as encompassing most currently popular set-learning methods. Based on this connection, we discuss the implications of our results for set learning more broadly, and identify some open questions on the universality of Janossy pooling in general. [abs] [ pdf ][ bib ] &copy JMLR 2022. ( edit, beta )

ICLR Conference 2021 Conference Paper

Interpretable Neural Architecture Search via Bayesian Optimisation with Weisfeiler-Lehman Kernels

  • Bin Xin Ru
  • Xingchen Wan
  • Xiaowen Dong 0001
  • Michael A. Osborne

Current neural architecture search (NAS) strategies focus only on finding a single, good, architecture. They offer little insight into why a specific network is performing well, or how we should modify the architecture if we want further improvements. We propose a Bayesian optimisation (BO) approach for NAS that combines the Weisfeiler-Lehman graph kernel with a Gaussian process surrogate. Our method not only optimises the architecture in a highly data-efficient manner, but also affords interpretability by discovering useful network features and their corresponding impact on the network performance. Moreover, our method is capable of capturing the topological structures of the architectures and is scalable to large graphs, thus making the high-dimensional and graph-like search spaces amenable to BO. We demonstrate empirically that our surrogate model is capable of identifying useful motifs which can guide the generation of new architectures. We finally show that our method outperforms existing NAS approaches to achieve the state of the art on both closed- and open-domain search spaces.

ICML Conference 2021 Conference Paper

Optimal Transport Kernels for Sequential and Parallel Neural Architecture Search

  • Vu Nguyen
  • Tam Le
  • Makoto Yamada
  • Michael A. Osborne

Neural architecture search (NAS) automates the design of deep neural networks. One of the main challenges in searching complex and non-continuous architectures is to compare the similarity of networks that the conventional Euclidean metric may fail to capture. Optimal transport (OT) is resilient to such complex structure by considering the minimal cost for transporting a network into another. However, the OT is generally not negative definite which may limit its ability to build the positive-definite kernels required in many kernel-dependent frameworks. Building upon tree-Wasserstein (TW), which is a negative definite variant of OT, we develop a novel discrepancy for neural architectures, and demonstrate it within a Gaussian process surrogate model for the sequential NAS settings. Furthermore, we derive a novel parallel NAS, using quality k-determinantal point process on the GP posterior, to select diverse and high-performing architectures from a discrete set of candidates. Empirically, we demonstrate that our TW-based approaches outperform other baselines in both sequential and parallel NAS.

ICML Conference 2021 Conference Paper

Think Global and Act Local: Bayesian Optimisation over High-Dimensional Categorical and Mixed Search Spaces

  • Xingchen Wan
  • Vu Nguyen
  • Huong Ha 0001
  • Bin Xin Ru
  • Cong Lu
  • Michael A. Osborne

High-dimensional black-box optimisation remains an important yet notoriously challenging problem. Despite the success of Bayesian optimisation methods on continuous domains, domains that are categorical, or that mix continuous and categorical variables, remain challenging. We propose a novel solution—we combine local optimisation with a tailored kernel design, effectively handling high-dimensional categorical and mixed search spaces, whilst retaining sample efficiency. We further derive convergence guarantee for the proposed approach. Finally, we demonstrate empirically that our method outperforms the current baselines on a variety of synthetic and real-world tasks in terms of performance, computational costs, or both.

ICML Conference 2020 Conference Paper

Bayesian Optimisation over Multiple Continuous and Categorical Inputs

  • Bin Xin Ru
  • Ahsan S. Alvi
  • Vu Nguyen
  • Michael A. Osborne
  • Stephen J. Roberts

Efficient optimisation of black-box problems that comprise both continuous and categorical inputs is important, yet poses significant challenges. Current approaches, like one-hot encoding, severely increase the dimension of the search space, while separate modelling of category-specific data is sample-inefficient. Both frameworks are not scalable to practical applications involving multiple categorical variables, each with multiple possible values. We propose a new approach, Continuous and Categorical Bayesian Optimisation (CoCaBO), which combines the strengths of multi-armed bandits and Bayesian optimisation to select values for both categorical and continuous inputs. We model this mixed-type space using a Gaussian Process kernel, designed to allow sharing of information across multiple categorical variables; this allows CoCaBO to leverage all available data efficiently. We extend our method to the batch setting and propose an efficient selection procedure that dynamically balances exploration and exploitation whilst encouraging batch diversity. We demonstrate empirically that our method outperforms existing approaches on both synthetic and real-world optimisation tasks with continuous and categorical inputs.

JMLR Journal 2020 Journal Article

Distributionally Ambiguous Optimization for Batch Bayesian Optimization

  • Nikitas Rontsis
  • Michael A. Osborne
  • Paul J. Goulart

We propose a novel, theoretically-grounded, acquisition function for Batch Bayesian Optimization informed by insights from distributionally ambiguous optimization. Our acquisition function is a lower bound on the well-known Expected Improvement function, which requires evaluation of a Gaussian expectation over a multivariate piecewise affine function. Our bound is computed instead by evaluating the best-case expectation over all probability distributions consistent with the same mean and variance as the original Gaussian distribution. Unlike alternative approaches, including Expected Improvement, our proposed acquisition function avoids multi-dimensional integrations entirely, and can be computed exactly - even on large batch sizes - as the solution of a tractable convex optimization problem. Our suggested acquisition function can also be optimized efficiently, since first and second derivative information can be calculated inexpensively as by-products of the acquisition function calculation itself. We derive various novel theorems that ground our work theoretically and we demonstrate superior performance via simple motivating examples, benchmark functions and real-world problems. [abs] [ pdf ][ bib ] [ code ] &copy JMLR 2020. ( edit, beta )

ICML Conference 2020 Conference Paper

Knowing The What But Not The Where in Bayesian Optimization

  • Vu Nguyen
  • Michael A. Osborne

Bayesian optimization has demonstrated impressive success in finding the optimum input x$\ast$ and output f$\ast$ = f(x$\ast$) = max f(x) of a black-box function f. In some applications, however, the optimum output is known in advance and the goal is to find the corresponding optimum input. Existing work in Bayesian optimization (BO) has not effectively exploited the knowledge of f$\ast$ for optimization. In this paper, we consider a new setting in BO in which the knowledge of the optimum output is available. Our goal is to exploit the knowledge about f$\ast$ to search for the input x$\ast$ efficiently. To achieve this goal, we first transform the Gaussian process surrogate using the information about the optimum output. Then, we propose two acquisition functions, called confidence bound minimization and expected regret minimization, which exploit the knowledge about the optimum output to identify the optimum input more efficient. We show that our approaches work intuitively and quantitatively better performance against standard BO methods. We demonstrate real applications in tuning a deep reinforcement learning algorithm on the CartPole problem and XGBoost on Skin Segmentation dataset in which the optimum values are publicly available.

AAAI Conference 2020 Conference Paper

ODIN: ODE-Informed Regression for Parameter and State Inference in Time-Continuous Dynamical Systems

  • Philippe Wenk
  • Gabriele Abbati
  • Michael A. Osborne
  • Bernhard Schölkopf
  • Andreas Krause
  • Stefan Bauer

Parameter inference in ordinary differential equations is an important problem in many applied sciences and in engineering, especially in a data-scarce setting. In this work, we introduce a novel generative modeling approach based on constrained Gaussian processes and leverage it to build a computationally and data efficient algorithm for state and parameter inference. In an extensive set of experiments, our approach outperforms the current state of the art for parameter inference both in terms of accuracy and computational cost. It also shows promising results for the much more challenging problem of model selection.

JMLR Journal 2020 Journal Article

Robust Reinforcement Learning with Bayesian Optimisation and Quadrature

  • Supratik Paul
  • Konstantinos Chatzilygeroudis
  • Kamil Ciosek
  • Jean-Baptiste Mouret
  • Michael A. Osborne
  • Shimon Whiteson

Bayesian optimisation has been successfully applied to a variety of reinforcement learning problems. However, the traditional approach for learning optimal policies in simulators does not utilise the opportunity to improve learning by adjusting certain environment variables: state features that are unobservable and randomly determined by the environment in a physical setting but are controllable in a simulator. This article considers the problem of finding a robust policy while taking into account the impact of environment variables. We present Alternating Optimisation and Quadrature (ALOQ), which uses Bayesian optimisation and Bayesian quadrature to address such settings. We also present Transferable ALOQ (TALOQ), for settings where simulator inaccuracies lead to difficulty in transferring the learnt policy to the physical system. We show that our algorithms are robust to the presence of significant rare events, which may not be observable under random sampling but play a substantial role in determining the optimal policy. Experimental results across different domains show that our algorithms learn robust policies efficiently. [abs] [ pdf ][ bib ] &copy JMLR 2020. ( edit, beta )

ICML Conference 2019 Conference Paper

AReS and MaRS Adversarial and MMD-Minimizing Regression for SDEs

  • Gabriele Abbati
  • Philippe Wenk
  • Michael A. Osborne
  • Andreas Krause 0001
  • Bernhard Schölkopf
  • Stefan Bauer

Stochastic differential equations are an important modeling class in many disciplines. Consequently, there exist many methods relying on various discretization and numerical integration schemes. In this paper, we propose a novel, probabilistic model for estimating the drift and diffusion given noisy observations of the underlying stochastic system. Using state-of-the-art adversarial and moment matching inference techniques, we avoid the discretization schemes of classical approaches. This leads to significant improvements in parameter accuracy and robustness given random initial guesses. On four established benchmark systems, we compare the performance of our algorithms to state-of-the-art solutions based on extended Kalman filtering and Gaussian processes.

ICML Conference 2019 Conference Paper

Asynchronous Batch Bayesian Optimisation with Improved Local Penalisation

  • Ahsan S. Alvi
  • Bin Xin Ru
  • Jan-P. Calliess
  • Stephen J. Roberts
  • Michael A. Osborne

Batch Bayesian optimisation (BO) has been successfully applied to hyperparameter tuning using parallel computing, but it is wasteful of resources: workers that complete jobs ahead of others are left idle. We address this problem by developing an approach, Penalising Locally for Asynchronous Bayesian Optimisation on K Workers (PLAyBOOK), for asynchronous parallel BO. We demonstrate empirically the efficacy of PLAyBOOK and its variants on synthetic tasks and a real-world problem. We undertake a comparison between synchronous and asynchronous BO, and show that asynchronous BO often outperforms synchronous batch BO in both wall-clock time and sample efficiency.

ICML Conference 2019 Conference Paper

Automated Model Selection with Bayesian Quadrature

  • Henry Chai
  • Jean-Francois Ton
  • Michael A. Osborne
  • Roman Garnett

We present a novel technique for tailoring Bayesian quadrature (BQ) to model selection. The state-of-the-art for comparing the evidence of multiple models relies on Monte Carlo methods, which converge slowly and are unreliable for computationally expensive models. Although previous research has shown that BQ offers sample efficiency superior to Monte Carlo in computing the evidence of an individual model, applying BQ directly to model comparison may waste computation producing an overly-accurate estimate for the evidence of a clearly poor model. We propose an automated and efficient algorithm for computing the most-relevant quantity for model selection: the posterior model probability. Our technique maximizes the mutual information between this quantity and observations of the models’ likelihoods, yielding efficient sample acquisition across disparate model spaces when likelihood observations are limited. Our method produces more-accurate posterior estimates using fewer likelihood evaluations than standard Bayesian quadrature and Monte Carlo estimators, as we demonstrate on synthetic and real-world examples.

ICML Conference 2019 Conference Paper

Fingerprint Policy Optimisation for Robust Reinforcement Learning

  • Supratik Paul
  • Michael A. Osborne
  • Shimon Whiteson

Policy gradient methods ignore the potential value of adjusting environment variables: unobservable state features that are randomly determined by the environment in a physical setting, but are controllable in a simulator. This can lead to slow learning, or convergence to suboptimal policies, if the environment variable has a large impact on the transition dynamics. In this paper, we present fingerprint policy optimisation (FPO), which finds a policy that is optimal in expectation across the distribution of environment variables. The central idea is to use Bayesian optimisation (BO) to actively select the distribution of the environment variable that maximises the improvement generated by each iteration of the policy gradient method. To make this BO practical, we contribute two easy-to-compute low-dimensional fingerprints of the current policy. Our experiments show that FPO can efficiently learn policies that are robust to significant rare events, which are unlikely to be observable under random sampling, but are key to learning good policies.

ICML Conference 2019 Conference Paper

On the Limitations of Representing Functions on Sets

  • Edward Wagstaff
  • Fabian B. Fuchs
  • Martin Engelcke
  • Ingmar Posner
  • Michael A. Osborne

Recent work on the representation of functions on sets has considered the use of summation in a latent space to enforce permutation invariance. In particular, it has been conjectured that the dimension of this latent space may remain fixed as the cardinality of the sets under consideration increases. However, we demonstrate that the analysis leading to this conjecture requires mappings which are highly discontinuous and argue that this is only of limited practical use. Motivated by this observation, we prove that an implementation of this model via continuous mappings (as provided by e. g. neural networks or Gaussian processes) actually imposes a constraint on the dimensionality of the latent space. Practical universal function representation for set inputs can only be achieved with a latent dimension at least the size of the maximum number of input elements.

ICML Conference 2018 Conference Paper

Fast Information-theoretic Bayesian Optimisation

  • Bin Xin Ru
  • Mark McLeod
  • Diego Granziol
  • Michael A. Osborne

Information-theoretic Bayesian optimisation techniques have demonstrated state-of-the-art performance in tackling important global optimisation problems. However, current information-theoretic approaches require many approximations in implementation, introduce often-prohibitive computational overhead and limit the choice of kernels available to model the objective. We develop a fast information-theoretic Bayesian Optimisation method, FITBO, that avoids the need for sampling the global minimiser, thus significantly reducing computational overhead. Moreover, in comparison with existing approaches, our method faces fewer constraints on kernel choice and enjoys the merits of dealing with the output space. We demonstrate empirically that FITBO inherits the performance associated with information-theoretic Bayesian optimisation, while being even faster than simpler Bayesian optimisation approaches, such as Expected Improvement.

UAI Conference 2018 Conference Paper

Improved Stochastic Trace Estimation using Mutually Unbiased Bases

  • Jack K. Fitzsimons
  • Michael A. Osborne
  • Stephen J. Roberts
  • Joseph F. Fitzsimons

The paper begins by introducing the definition and construction of mutually unbiased bases, which are a widely used concept in quantum information processing but have received little to no attention in the machine learning and statistics literature. We demonstrate their usefulness by using them to create a new sampling technique which offers an improvement on the previously well established bounds of stochastic trace estimation. This approach offers a new state of the art single shot sampling variance while requiring O(log(n)) random bits for x ∈ Rn which significantly improves on traditional methods such as fixed basis methods, Hutchinson’s and Gaussian estimators in terms of the number of random bits required and worst case sample variance.

ICML Conference 2018 Conference Paper

Optimization, Fast and Slow: Optimally Switching between Local and Bayesian Optimization

  • Mark McLeod
  • Stephen J. Roberts
  • Michael A. Osborne

We develop the first Bayesian Optimization algorithm, BLOSSOM, which selects between multiple alternative acquisition functions and traditional local optimization at each step. This is combined with a novel stopping condition based on expected regret. This pairing allows us to obtain the best characteristics of both local and Bayesian optimization, making efficient use of function evaluations while yielding superior convergence to the global minimum on a selection of optimization problems, and also halting optimization once a principled and intuitive stopping condition has been fulfilled.

UAI Conference 2017 Conference Paper

Bayesian Inference of Log Determinants

  • Jack K. Fitzsimons
  • Kurt Cutajar
  • Maurizio Filippone
  • Michael A. Osborne
  • Stephen J. Roberts

The log determinant of a kernel matrix appears in a variety of machine learning problems, ranging from determinantal point processes and generalized Markov random fields, through to the training of Gaussian processes. Exact calculation of this term is often intractable when the size of the kernel matrix exceeds a few thousands. In the spirit of probabilistic numerics, we reinterpret the problem of computing the log determinant as a Bayesian inference problem. In particular, we combine prior knowledge in the form of bounds from matrix theory and evidence derived from stochastic trace estimation to obtain probabilistic estimates for the log determinant and its associated uncertainty within a given computational budget. Beyond its novelty and theoretic appeal, the performance of our proposal is competitive with state-of-the-art approaches to approximating the log determinant, while also quantifying the uncertainty due to budgetconstrained evidence.

ICML Conference 2016 Conference Paper

Preconditioning Kernel Matrices

  • Kurt Cutajar
  • Michael A. Osborne
  • John P. Cunningham
  • Maurizio Filippone

The computational and storage complexity of kernel machines presents the primary barrier to their scaling to large, modern, datasets. A common way to tackle the scalability issue is to use the conjugate gradient algorithm, which relieves the constraints on both storage (the kernel matrix need not be stored) and computation (both stochastic gradients and parallelization can be used). Even so, conjugate gradient is not without its own issues: the conditioning of kernel matrices is often such that conjugate gradients will have poor convergence in practice. Preconditioning is a common approach to alleviating this issue. Here we propose preconditioned conjugate gradients for kernel machines, and develop a broad range of preconditioners particularly useful for kernel matrices. We describe a scalable approach to both solving kernel machines and learning their hyperparameters. We show this approach is exact in the limit of iterations and outperforms state-of-the-art approximations for a given computational budget.

ICML Conference 2015 Conference Paper

Variational Inference for Gaussian Process Modulated Poisson Processes

  • Chris M. Lloyd
  • Tom Gunter
  • Michael A. Osborne
  • Stephen J. Roberts

We present the first fully variational Bayesian inference scheme for continuous Gaussian-process-modulated Poisson processes. Such point processes are used in a variety of domains, including neuroscience, geo-statistics and astronomy, but their use is hindered by the computational cost of existing inference schemes. Our scheme: requires no discretisation of the domain; scales linearly in the number of observed events; and is many orders of magnitude faster than previous sampling based approaches. The resulting algorithm is shown to outperform standard methods on synthetic examples, coal mining disaster data and in the prediction of Malaria incidences in Kenya.

UAI Conference 2014 Conference Paper

Active Learning of Linear Embeddings for Gaussian Processes

  • Roman Garnett
  • Michael A. Osborne
  • Philipp Hennig

We propose an active learning method for discovering low-dimensional structure in highdimensional Gaussian process (GP) tasks. Such problems are increasingly frequent and important, but have hitherto presented severe practical difficulties. We further introduce a novel technique for approximately marginalizing GP hyperparameters, yielding marginal predictions robust to hyperparameter misspecification. Our method offers an efficient means of performing GP regression, quadrature, or Bayesian optimization in high-dimensional spaces.

UAI Conference 2014 Conference Paper

Efficient Bayesian Nonparametric Modelling of Structured Point Processes

  • Tom Gunter
  • Chris M. Lloyd
  • Michael A. Osborne
  • Stephen J. Roberts

This paper presents a Bayesian generative model for dependent Cox point processes, alongside an efficient inference scheme which scales as if the point processes were modelled independently. We can handle missing data naturally, infer latent structure, and cope with large numbers of observed processes. A further novel contribution enables the model to work effectively in higher dimensional spaces. Using this method, we achieve vastly improved predictive performance on both 2D and 1D real data, validating our structured approach.

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