Author name cluster

Jakub Tomczak

Possible papers associated with this exact author name in Arrow. This page groups case-insensitive exact name matches and is not a full identity disambiguation profile.

7 papers

1 author row

NeurIPS Conference 2023 Conference Paper

A-NeSI: A Scalable Approximate Method for Probabilistic Neurosymbolic Inference

Emile van Krieken
Thiviyan Thanapalasingam
Jakub Tomczak
Frank Van Harmelen
Annette Ten Teije

We study the problem of combining neural networks with symbolic reasoning. Recently introduced frameworks for Probabilistic Neurosymbolic Learning (PNL), such as DeepProbLog, perform exponential-time exact inference, limiting the scalability of PNL solutions. We introduce Approximate Neurosymbolic Inference (A-NeSI): a new framework for PNL that uses neural networks for scalable approximate inference. A-NeSI 1) performs approximate inference in polynomial time without changing the semantics of probabilistic logics; 2) is trained using data generated by the background knowledge; 3) can generate symbolic explanations of predictions; and 4) can guarantee the satisfaction of logical constraints at test time, which is vital in safety-critical applications. Our experiments show that A-NeSI is the first end-to-end method to solve three neurosymbolic tasks with exponential combinatorial scaling. Finally, our experiments show that A-NeSI achieves explainability and safety without a penalty in performance.

PDF Details

NeurIPS Conference 2022 Conference Paper

Alleviating Adversarial Attacks on Variational Autoencoders with MCMC

Anna Kuzina
Max Welling
Jakub Tomczak

Variational autoencoders (VAEs) are latent variable models that can generate complex objects and provide meaningful latent representations. Moreover, they could be further used in downstream tasks such as classification. As previous work has shown, one can easily fool VAEs to produce unexpected latent representations and reconstructions for a visually slightly modified input. Here, we examine several objective functions for adversarial attacks construction proposed previously and present a solution to alleviate the effect of these attacks. Our method utilizes the Markov Chain Monte Carlo (MCMC) technique in the inference step that we motivate with a theoretical analysis. Thus, we do not incorporate any extra costs during training and the performance on non-attacked inputs is not decreased. We validate our approach on a variety of datasets (MNIST, Fashion MNIST, Color MNIST, CelebA) and VAE configurations ($\beta$-VAE, NVAE, $\beta$-TCVAE), and show that our approach consistently improves the model robustness to adversarial attacks.

PDF Details

NeurIPS Conference 2022 Conference Paper

On Analyzing Generative and Denoising Capabilities of Diffusion-based Deep Generative Models

Kamil Deja
Anna Kuzina
Tomasz Trzcinski
Jakub Tomczak

Diffusion-based Deep Generative Models (DDGMs) offer state-of-the-art performance in generative modeling. Their main strength comes from their unique setup in which a model (the backward diffusion process) is trained to reverse the forward diffusion process, which gradually adds noise to the input signal. Although DDGMs are well studied, it is still unclear how the small amount of noise is transformed during the backward diffusion process. Here, we focus on analyzing this problem to gain more insight into the behavior of DDGMs and their denoising and generative capabilities. We observe a fluid transition point that changes the functionality of the backward diffusion process from generating a (corrupted) image from noise to denoising the corrupted image to the final sample. Based on this observation, we postulate to divide a DDGM into two parts: a denoiser and a generator. The denoiser could be parameterized by a denoising auto-encoder, while the generator is a diffusion-based model with its own set of parameters. We experimentally validate our proposition, showing its pros and cons.

PDF Details

NeurIPS Conference 2021 Conference Paper

Invertible DenseNets with Concatenated LipSwish

Yura Perugachi-Diaz
Jakub Tomczak
Sandjai Bhulai

We introduce Invertible Dense Networks (i-DenseNets), a more parameter efficient extension of Residual Flows. The method relies on an analysis of the Lipschitz continuity of the concatenation in DenseNets, where we enforce invertibility of the network by satisfying the Lipschitz constant. Furthermore, we propose a learnable weighted concatenation, which not only improves the model performance but also indicates the importance of the concatenated weighted representation. Additionally, we introduce the Concatenated LipSwish as activation function, for which we show how to enforce the Lipschitz condition and which boosts performance. The new architecture, i-DenseNet, out-performs Residual Flow and other flow-based models on density estimation evaluated in bits per dimension, where we utilize an equal parameter budget. Moreover, we show that the proposed model out-performs Residual Flows when trained as a hybrid model where the model is both a generative and a discriminative model.

PDF Details

NeurIPS Conference 2021 Conference Paper

Storchastic: A Framework for General Stochastic Automatic Differentiation

Emile Krieken
Jakub Tomczak
Annette Ten Teije

Modelers use automatic differentiation (AD) of computation graphs to implement complex Deep Learning models without defining gradient computations. Stochastic AD extends AD to stochastic computation graphs with sampling steps, which arise when modelers handle the intractable expectations common in Reinforcement Learning and Variational Inference. However, current methods for stochastic AD are limited: They are either only applicable to continuous random variables and differentiable functions, or can only use simple but high variance score-function estimators. To overcome these limitations, we introduce Storchastic, a new framework for AD of stochastic computation graphs. Storchastic allows the modeler to choose from a wide variety of gradient estimation methods at each sampling step, to optimally reduce the variance of the gradient estimates. Furthermore, Storchastic is provably unbiased for estimation of any-order gradients, and generalizes variance reduction techniques to higher-order gradient estimates. Finally, we implement Storchastic as a PyTorch library at github. com/HEmile/storchastic.

PDF Details

NeurIPS Conference 2020 Conference Paper

The Convolution Exponential and Generalized Sylvester Flows

Emiel Hoogeboom
Victor Garcia Satorras
Jakub Tomczak
Max Welling

This paper introduces a new method to build linear flows, by taking the exponential of a linear transformation. This linear transformation does not need to be invertible itself, and the exponential has the following desirable properties: it is guaranteed to be invertible, its inverse is straightforward to compute and the log Jacobian determinant is equal to the trace of the linear transformation. An important insight is that the exponential can be computed implicitly, which allows the use of convolutional layers. Using this insight, we develop new invertible transformations named convolution exponentials and graph convolution exponentials, which retain the equivariance of their underlying transformations. In addition, we generalize Sylvester Flows and propose Convolutional Sylvester Flows which are based on the generalization and the convolution exponential as basis change. Empirically, we show that the convolution exponential outperforms other linear transformations in generative flows on CIFAR10 and the graph convolution exponential improves the performance of graph normalizing flows. In addition, we show that Convolutional Sylvester Flows improve performance over residual flows as a generative flow model measured in log-likelihood.

PDF Details

NeurIPS Conference 2019 Conference Paper

Combinatorial Bayesian Optimization using the Graph Cartesian Product

Changyong Oh
Jakub Tomczak
Efstratios Gavves
Max Welling

This paper focuses on Bayesian Optimization (BO) for objectives on combinatorial search spaces, including ordinal and categorical variables. Despite the abundance of potential applications of Combinatorial BO, including chipset configuration search and neural architecture search, only a handful of methods have been pro- posed. We introduce COMBO, a new Gaussian Process (GP) BO. COMBO quantifies “smoothness” of functions on combinatorial search spaces by utilizing a combinatorial graph. The vertex set of the combinatorial graph consists of all possible joint assignments of the variables, while edges are constructed using the graph Cartesian product of the sub-graphs that represent the individual variables. On this combinatorial graph, we propose an ARD diffusion kernel with which the GP is able to model high-order interactions between variables leading to better performance. Moreover, using the Horseshoe prior for the scale parameter in the ARD diffusion kernel results in an effective variable selection procedure, making COMBO suitable for high dimensional problems. Computationally, in COMBO the graph Cartesian product allows the Graph Fourier Transform calculation to scale linearly instead of exponentially. We validate COMBO in a wide array of real- istic benchmarks, including weighted maximum satisfiability problems and neural architecture search. COMBO outperforms consistently the latest state-of-the-art while maintaining computational and statistical efficiency

PDF Details