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Haoyu Peter Wang

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7 papers

2 author rows

ICML Conference 2025 Conference Paper

Generalization Principles for Inference over Text-Attributed Graphs with Large Language Models

Haoyu Peter Wang
Shikun Liu
Rongzhe Wei
Pan Li 0005

Large language models (LLMs) have recently been introduced to graph learning, aiming to extend their zero-shot generalization success to tasks where labeled graph data is scarce. Among these applications, inference over text-attributed graphs (TAGs) presents unique challenges: existing methods struggle with LLMs’ limited context length for processing large node neighborhoods and the misalignment between node embeddings and the LLM token space. To address these issues, we establish two key principles for ensuring generalization and derive the framework LLM-BP accordingly: (1) Unifying the attribute space with task-adaptive embeddings, where we leverage LLM-based encoders and task-aware prompting to enhance generalization of the text attribute embeddings; (2) Developing a generalizable graph information aggregation mechanism, for which we adopt belief propagation with LLM-estimated parameters that adapt across graphs. Evaluations on 11 real-world TAG benchmarks demonstrate that LLM-BP significantly outperforms existing approaches, achieving 8. 10% improvement with task-conditional embeddings and an additional 1. 71% gain from adaptive aggregation. The code and task-adaptive embeddings are publicly available.

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ICLR Conference 2025 Conference Paper

Scalable Discrete Diffusion Samplers: Combinatorial Optimization and Statistical Physics

Sebastian Sanokowski
Wilhelm Franz Berghammer
Haoyu Peter Wang
Martin Ennemoser
Sepp Hochreiter
Sebastian Lehner

Learning to sample from complex unnormalized distributions over discrete domains emerged as a promising research direction with applications in statistical physics, variational inference, and combinatorial optimization. Recent work has demonstrated the potential of diffusion models in this domain. However, existing methods face limitations in memory scaling and thus the number of attainable diffusion steps since they require backpropagation through the entire generative process. To overcome these limitations we introduce two novel training methods for discrete diffusion samplers, one grounded in the policy gradient theorem and the other one leveraging Self-Normalized Neural Importance Sampling (SN-NIS). These methods yield memory-efficient training and achieve state-of-the-art results in unsupervised combinatorial optimization. Numerous scientific applications additionally require the ability of unbiased sampling. We introduce adaptations of SN-NIS and Neural Markov Chain Monte Carlo that enable for the first time the application of discrete diffusion models to this problem. We validate our methods on Ising model benchmarks and find that they outperform popular autoregressive approaches. Our work opens new avenues for applying diffusion models to a wide range of scientific applications in discrete domains that were hitherto restricted to exact likelihood models.

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ICLR Conference 2025 Conference Paper

What Are Good Positional Encodings for Directed Graphs?

Yinan Huang
Haoyu Peter Wang
Pan Li 0005

Positional encodings (PEs) are essential for building powerful and expressive graph neural networks and graph transformers, as they effectively capture the relative spatial relationships between nodes. Although extensive research has been devoted to PEs in undirected graphs, PEs for directed graphs remain relatively unexplored. This work seeks to address this gap. We first introduce the notion of *Walk Profile*, a generalization of walk-counting sequences for directed graphs. A walk profile encompasses numerous structural features crucial for directed graph-relevant applications, such as program analysis and circuit performance prediction. We identify the limitations of existing PE methods in representing walk profiles and propose a novel *Multi-q Magnetic Laplacian PE*, which extends the Magnetic Laplacian eigenvector-based PE by incorporating multiple potential factors. The new PE can provably express walk profiles. Furthermore, we generalize prior basis-invariant neural networks to enable the stable use of the new PE in the complex domain. Our numerical experiments validate the expressiveness of the proposed PEs and demonstrate their effectiveness in solving sorting network satisfiability and performing well on general circuit benchmarks. Our code is available at https://github.com/Graph-COM/Multi-q-Maglap.

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TMLR Journal 2024 Journal Article

DIG-MILP: a Deep Instance Generator for Mixed-Integer Linear Programming with Feasibility Guarantee

Haoyu Peter Wang
Jialin Liu
Xiaohan Chen
Xinshang Wang
Pan Li
Wotao Yin

Mixed-integer linear programming (MILP) stands as a notable NP-hard problem pivotal to numerous crucial industrial applications. The development of effective algorithms, the tuning of solvers, and the training of machine learning models for MILP resolution all hinge on access to extensive, diverse, and representative data. Yet compared to the abundant naturally occurring data in image and text realms, MILP is markedly data deficient, underscoring the vital role of synthetic MILP generation. We present DIG-MILP, a deep generative framework adept at extracting deep-level structural features from highly limited MILP data and producing instances that closely mirror the target data. Notably, by leveraging the MILP duality, DIG-MILP guarantees a correct and complete generation space as well as ensures the boundedness and feasibility of the generated instances. Our empirical study highlights the novelty and quality of the instances generated by DIG-MILP through two distinct downstream tasks: (S1) Data sharing, where solver solution times correlate highly positive between original and DIG-MILP-generated instances, allowing data sharing for solver tuning without publishing the original data; (S2) Data Augmentation, wherein the DIG-MILP-generated instances bolster the generalization performance of machine learning models tasked with resolving MILP problems.

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TMLR Journal 2024 Journal Article

On the Inherent Privacy Properties of Discrete Denoising Diffusion Models

Rongzhe Wei
Eleonora Kreacic
Haoyu Peter Wang
Haoteng YIN
Eli Chien
Vamsi K. Potluru
Pan Li

Privacy concerns have led to a surge in the creation of synthetic datasets, with diffusion models emerging as a promising avenue. Although prior studies have performed empirical evaluations on these models, there has been a gap in providing a mathematical characterization of their privacy-preserving capabilities. To address this, we present the pioneering theoretical exploration of the privacy preservation inherent in \emph{discrete diffusion models} (DDMs) for discrete dataset generation. Focusing on per-instance differential privacy (pDP), our framework elucidates the potential privacy leakage for each data point in a given training dataset, offering insights into how the privacy loss of each point correlates with the dataset's distribution. Our bounds also show that training with $s$-sized data points leads to a surge in privacy leakage from $(\epsilon, \mathcal{O}(\frac{1}{s^2\epsilon}))$-pDP to $(\epsilon, \mathcal{O}(\frac{1}{s\epsilon}))$-pDP of the DDM during the transition from the pure noise to the synthetic clean data phase, and a faster decay in diffusion coefficients amplifies the privacy guarantee. Finally, we empirically verify our theoretical findings on both synthetic and real-world datasets.

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ICLR Conference 2023 Conference Paper

Unsupervised Learning for Combinatorial Optimization Needs Meta Learning

Haoyu Peter Wang
Pan Li 0005

A general framework of unsupervised learning for combinatorial optimization (CO) is to train a neural network whose output gives a problem solution by directly optimizing the CO objective. Albeit with some advantages over traditional solvers, current frameworks optimize an averaged performance over the distribution of historical problem instances, which misaligns with the actual goal of CO that looks for a good solution to every future encountered instance. With this observation, we propose a new objective of unsupervised learning for CO where the goal of learning is to search for good initialization for future problem instances rather than give direct solutions. We propose a meta-learning-based training pipeline for this new objective. Our method achieves good performance. We observe that even the initial solution given by our model before fine-tuning can significantly outperform the baselines under various evaluation settings including evaluation across multiple datasets, and the case with big shifts in the problem scale. The reason we conjecture is that meta-learning-based training lets the model be loosely tied to each local optimum for a training instance while being more adaptive to the changes of optimization landscapes across instances.

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NeurIPS Conference 2022 Conference Paper

Unsupervised Learning for Combinatorial Optimization with Principled Objective Relaxation

Haoyu Peter Wang
Nan Wu
Hang Yang
Cong Hao
Pan Li

Using machine learning to solve combinatorial optimization (CO) problems is challenging, especially when the data is unlabeled. This work proposes an unsupervised learning framework for CO problems. Our framework follows the standard relaxation-plus-rounding approach and adopts neural networks to parameterize the relaxed solutions so that simple back-propagation can train them end-to-end. Our key contribution is the observation that if the relaxed objective satisfies entry-wise concavity, a low optimization loss guarantees the quality of the obtained integral solutions. This observation significantly generalizes the applicability of the previous framework inspired by Erdos' probabilistic method (Karalias & Loukas, 2020). Our framework is particularly suitable to guide the design of objective models in the applications where the objectives are not given explicitly while requiring being modeled and learned first. We evaluate our framework by solving a synthetic graph optimization problem, and two real-world applications including resource allocation in circuit design and approximate computing. Our framework largely outperforms the baselines based on reinforcement learning and Gumbel-softmax tricks.

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