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Florian Graf

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8 papers

2 author rows

NeurIPS Conference 2025 Conference Paper

The Flood Complex: Large-Scale Persistent Homology on Millions of Points

Florian Graf
Paolo Pellizzoni
Martin Uray
Stefan Huber
Roland Kwitt

We consider the problem of computing persistent homology (PH) for large-scale Euclidean point cloud data, aimed at downstream machine learning tasks, where the exponential growth of the most widely-used Vietoris-Rips complex imposes serious computational limitations. Although more scalable alternatives such as the Alpha complex or sparse Rips approximations exist, they often still result in a prohibitively large number of simplices. This poses challenges in the complex construction and in the subsequent PH computation, prohibiting their use on large-scale point clouds. To mitigate these issues, we introduce the Flood complex, inspired by the advantages of the Alpha and Witness complex constructions. Informally, at a given filtration value $r\geq 0$, the Flood complex contains all simplices from a Delaunay triangulation of a small subset of a point cloud $X$ that are fully covered by the union of balls of radius $r$ emanating from $X$, a process we call flooding. Our construction allows for efficient PH computation, possesses several desirable theoretical properties, and is amenable to GPU parallelization. Scaling experiments on 3D point cloud data show that we can compute PH of up to dimension 2 on several millions of points. Importantly, when evaluating object classification performance on real-world and synthetic data, we provide evidence that this scaling capability is needed, especially if objects are geometrically or topologically complex, yielding performance superior to other PH-based methods and neural networks for point cloud data. Source code and datasets are available on GitHub: https: //github. com/plus-rkwitt/flooder

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NeurIPS Conference 2024 Conference Paper

Neural Persistence Dynamics

Sebastian Zeng
Florian Graf
Martin Uray
Stefan Huber
Roland Kwitt

We consider the problem of learning the dynamics in the topology of time-evolving point clouds, the prevalent spatiotemporal model for systems exhibiting collective behavior, such as swarms of insects and birds or particles in physics. In such systems, patterns emerge from (local) interactions among self-propelled entities. While several well-understood governing equations for motion and interaction exist, they are notoriously difficult to fit to data, as most prior work requires knowledge about individual motion trajectories, i. e. , a requirement that is challenging to satisfy with an increasing number of entities. To evade such confounding factors, we investigate collective behavior from a topological perspective, but instead of summarizing entire observation sequences (as done previously), we propose learning a latent dynamical model from topological features per time point. The latter is then used to formulate a downstream regression task to predict the parametrization of some a priori specified governing equation. We implement this idea based on a latent ODE learned from vectorized (static) persistence diagrams and show that a combination of recent stability results for persistent homology justifies this modeling choice. Various (ablation) experiments not only demonstrate the relevance of each model component but provide compelling empirical evidence that our proposed model -- Neural Persistence Dynamics -- substantially outperforms the state-of-the-art across a diverse set of parameter regression tasks.

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NeurIPS Conference 2023 Conference Paper

Latent SDEs on Homogeneous Spaces

Sebastian Zeng
Florian Graf
Roland Kwitt

We consider the problem of variational Bayesian inference in a latent variable model where a (possibly complex) observed stochastic process is governed by the unobserved solution of a latent stochastic differential equation (SDE). Motivated by the challenges that arise when trying to learn a latent SDE in $\mathbb{R}^n$ from large-scale data, such as efficient gradient computation, we take a step back and study a specific subclass instead. In our case, the SDE evolves inside a homogeneous latent space and is induced by stochastic dynamics of the corresponding (matrix) Lie group. In the context of learning problems, SDEs on the $n$-dimensional unit sphere are arguably the most relevant incarnation of this setup. For variational inference, the sphere not only facilitates using a uniform prior on the initial state of the SDE, but we also obtain a particularly simple and intuitive expression for the KL divergence between the approximate posterior and prior process in the evidence lower bound. We provide empirical evidence that a latent SDE of the proposed type can be learned efficiently by means of an existing one-step geometric Euler-Maruyama scheme. Despite restricting ourselves to a less diverse class of SDEs, we achieve competitive or even state-of-the-art performance on a collection of time series interpolation and classification benchmarks.

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NeurIPS Conference 2022 Conference Paper

On Measuring Excess Capacity in Neural Networks

Florian Graf
Sebastian Zeng
Bastian Rieck
Marc Niethammer
Roland Kwitt

We study the excess capacity of deep networks in the context of supervised classification. That is, given a capacity measure of the underlying hypothesis class - in our case, empirical Rademacher complexity - to what extent can we (a priori) constrain this class while retaining an empirical error on a par with the unconstrained regime? To assess excess capacity in modern architectures (such as residual networks), we extend and unify prior Rademacher complexity bounds to accommodate function composition and addition, as well as the structure of convolutions. The capacity-driving terms in our bounds are the Lipschitz constants of the layers and a (2, 1) group norm distance to the initializations of the convolution weights. Experiments on benchmark datasets of varying task difficulty indicate that (1) there is a substantial amount of excess capacity per task, and (2) capacity can be kept at a surprisingly similar level across tasks. Overall, this suggests a notion of compressibility with respect to weight norms, complementary to classic compression via weight pruning. Source code is available at https: //github. com/rkwitt/excess_capacity.

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ICML Conference 2021 Conference Paper

Dissecting Supervised Constrastive Learning

Florian Graf
Christoph D. Hofer
Marc Niethammer
Roland Kwitt

Minimizing cross-entropy over the softmax scores of a linear map composed with a high-capacity encoder is arguably the most popular choice for training neural networks on supervised learning tasks. However, recent works show that one can directly optimize the encoder instead, to obtain equally (or even more) discriminative representations via a supervised variant of a contrastive objective. In this work, we address the question whether there are fundamental differences in the sought-for representation geometry in the output space of the encoder at minimal loss. Specifically, we prove, under mild assumptions, that both losses attain their minimum once the representations of each class collapse to the vertices of a regular simplex, inscribed in a hypersphere. We provide empirical evidence that this configuration is attained in practice and that reaching a close-to-optimal state typically indicates good generalization performance. Yet, the two losses show remarkably different optimization behavior. The number of iterations required to perfectly fit to data scales superlinearly with the amount of randomly flipped labels for the supervised contrastive loss. This is in contrast to the approximately linear scaling previously reported for networks trained with cross-entropy.

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NeurIPS Conference 2021 Conference Paper

Topological Attention for Time Series Forecasting

Sebastian Zeng
Florian Graf
Christoph Hofer
Roland Kwitt

The problem of (point) forecasting univariate time series is considered. Most approaches, ranging from traditional statistical methods to recent learning-based techniques with neural networks, directly operate on raw time series observations. As an extension, we study whether local topological properties, as captured via persistent homology, can serve as a reliable signal that provides complementary information for learning to forecast. To this end, we propose topological attention, which allows attending to local topological features within a time horizon of historical data. Our approach easily integrates into existing end-to-end trainable forecasting models, such as N-BEATS, and, in combination with the latter exhibits state-of-the-art performance on the large-scale M4 benchmark dataset of 100, 000 diverse time series from different domains. Ablation experiments, as well as a comparison to recent techniques in a setting where only a single time series is available for training, corroborate the beneficial nature of including local topological information through an attention mechanism.

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ICML Conference 2020 Conference Paper

Graph Filtration Learning

Christoph D. Hofer
Florian Graf
Bastian Rieck
Marc Niethammer
Roland Kwitt

We propose an approach to learning with graph-structured data in the problem domain of graph classification. In particular, we present a novel type of readout operation to aggregate node features into a graph-level representation. To this end, we leverage persistent homology computed via a real-valued, learnable, filter function. We establish the theoretical foundation for differentiating through the persistent homology computation. Empirically, we show that this type of readout operation compares favorably to previous techniques, especially when the graph connectivity structure is informative for the learning problem.

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ICML Conference 2020 Conference Paper

Topologically Densified Distributions

Christoph D. Hofer
Florian Graf
Marc Niethammer
Roland Kwitt

We study regularization in the context of small sample-size learning with over-parametrized neural networks. Specifically, we shift focus from architectural properties, such as norms on the network weights, to properties of the internal representations before a linear classifier. Specifically, we impose a topological constraint on samples drawn from the probability measure induced in that space. This provably leads to mass concentration effects around the representations of training instances, i. e. , a property beneficial for generalization. By leveraging previous work to impose topological constrains in a neural network setting, we provide empirical evidence (across various vision benchmarks) to support our claim for better generalization.

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