Author name cluster

Carl Yang 0001

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5 papers

1 author row

ICML Conference 2025 Conference Paper

BoxLM: Unifying Structures and Semantics of Medical Concepts for Diagnosis Prediction in Healthcare

Yanchao Tan
Hang Lv 0010
Yunfei Zhan
Guofang Ma
Bo Xiong 0001
Carl Yang 0001

Language Models (LMs) have advanced diagnosis prediction by leveraging the semantic understanding of medical concepts in Electronic Health Records (EHRs). Despite these advancements, existing LM-based methods often fail to capture the structures of medical concepts (e. g. , hierarchy structure from domain knowledge). In this paper, we propose BoxLM, a novel framework that unifies the structures and semantics of medical concepts for diagnosis prediction. Specifically, we propose a structure-semantic fusion mechanism via box embeddings, which integrates both ontology-driven and EHR-driven hierarchical structures with LM-based semantic embeddings, enabling interpretable medical concept representations. Furthermore, in the box-aware diagnosis prediction module, an evolve-and-memorize patient box learning mechanism is proposed to model the temporal dynamics of patient visits, and a volume-based similarity measurement is proposed to enable accurate diagnosis prediction. Extensive experiments demonstrate that BoxLM consistently outperforms state-of-the-art baselines, especially achieving strong performance in few-shot learning scenarios, showcasing its practical utility in real-world clinical settings.

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ICML Conference 2025 Conference Paper

EAGLES: Towards Effective, Efficient, and Economical Federated Graph Learning via Unified Sparsification

Zitong Shi
Guancheng Wan
Wenke Huang 0003
Guibin Zhang
He Li 0054
Carl Yang 0001
Mang Ye

Federated Graph Learning (FGL) has gained significant attention as a privacy-preserving approach to collaborative learning, but the computational demands increase substantially as datasets grow and Graph Neural Network (GNN) layers deepen. To address these challenges, we propose $\textbf{EAGLES}$, a unified sparsification framework. EAGLES applies client-consensus parameter sparsification to generate multiple unbiased subnetworks at varying sparsity levels, reducing the need for iterative adjustments and mitigating performance degradation. In the graph structure domain, we introduced a dual-expert approach: a $\textit{graph sparsification expert}$ uses multi-criteria node-level sparsification, and a $\textit{graph synergy expert}$ integrates contextual node information to produce optimal sparse subgraphs. Furthermore, the framework introduces a novel distance metric that leverages node contextual information to measure structural similarity among clients, fostering effective knowledge sharing. We also introduce the $\textbf{Harmony Sparsification Principle}$, EAGLES balances model performance with lightweight graph and model structures. Extensive experiments demonstrate its superiority, achieving competitive performance on various datasets, such as reducing training FLOPS by 82% $\downarrow$ and communication costs by 80% $\downarrow$ on the ogbn-proteins dataset, while maintaining high performance.

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ICML Conference 2025 Conference Paper

GuardAgent: Safeguard LLM Agents via Knowledge-Enabled Reasoning

Zhen Xiang
Linzhi Zheng
Yanjie Li
Junyuan Hong
Qinbin Li
Han Xie
Jiawei Zhang 0013
Zidi Xiong

The rapid advancement of large language model (LLM) agents has raised new concerns regarding their safety and security. In this paper, we propose GuardAgent, the first guardrail agent to protect target agents by dynamically checking whether their actions satisfy given safety guard requests. Specifically, GuardAgent first analyzes the safety guard requests to generate a task plan, and then maps this plan into guardrail code for execution. By performing the code execution, GuardAgent can deterministically follow the safety guard request and safeguard target agents. In both steps, an LLM is utilized as the reasoning component, supplemented by in-context demonstrations retrieved from a memory module storing experiences from previous tasks. In addition, we propose two novel benchmarks: EICU-AC benchmark to assess the access control for healthcare agents and Mind2Web-SC benchmark to evaluate the safety policies for web agents. We show that GuardAgent effectively moderates the violation actions for different types of agents on these two benchmarks with over 98% and 83% guardrail accuracies, respectively. Project page: https: //guardagent. github. io/

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ICLR Conference 2025 Conference Paper

Subgraph Federated Learning for Local Generalization

Sungwon Kim 0002
Yoonho Lee 0002
Yunhak Oh
Namkyeong Lee
Sukwon Yun
Junseok Lee 0002
Sein Kim
Carl Yang 0001

Federated Learning (FL) on graphs enables collaborative model training to enhance performance without compromising the privacy of each client. However, existing methods often overlook the mutable nature of graph data, which frequently introduces new nodes and leads to shifts in label distribution. Since they focus solely on performing well on each client's local data, they are prone to overfitting to their local distributions (i.e., local overfitting), which hinders their ability to generalize to unseen data with diverse label distributions. In contrast, our proposed method, FedLoG, effectively tackles this issue by mitigating local overfitting. Our model generates global synthetic data by condensing the reliable information from each class representation and its structural information across clients. Using these synthetic data as a training set, we alleviate the local overfitting problem by adaptively generalizing the absent knowledge within each local dataset. This enhances the generalization capabilities of local models, enabling them to handle unseen data effectively. Our model outperforms baselines in our proposed experimental settings, which are designed to measure generalization power to unseen data in practical scenarios. Our code is available at https://github.com/sung-won-kim/FedLoG

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ICLR Conference 2022 Conference Paper

Graph Auto-Encoder via Neighborhood Wasserstein Reconstruction

Mingyue Tang
Pan Li 0005
Carl Yang 0001

Graph neural networks (GNNs) have drawn significant research attention recently, mostly under the setting of semi-supervised learning. When task-agnostic representations are preferred or supervision is simply unavailable, the auto-encoder framework comes in handy with a natural graph reconstruction objective for unsupervised GNN training. However, existing graph auto-encoders are designed to reconstruct the direct links, so GNNs trained in this way are only optimized towards proximity-oriented graph mining tasks, and will fall short when the topological structures matter. In this work, we revisit the graph encoding process of GNNs which essentially learns to encode the neighborhood information of each node into an embedding vector, and propose a novel graph decoder to reconstruct the entire neighborhood information regarding both proximity and structure via Neighborhood Wasserstein Reconstruction (NWR). Specifically, from the GNN embedding of each node, NWR jointly predicts its node degree and neighbor feature distribution, where the distribution prediction adopts an optimal-transport loss based on the Wasserstein distance. Extensive experiments on both synthetic and real-world network datasets show that the unsupervised node representations learned with NWR have much more advantageous in structure-oriented graph mining tasks, while also achieving competitive performance in proximity-oriented ones.

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