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Adrien Depeursinge

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YNICL Journal 2023 Journal Article

How far MS lesion detection and segmentation are integrated into the clinical workflow? A systematic review

  • Federico Spagnolo
  • Adrien Depeursinge
  • Sabine Schädelin
  • Aysenur Akbulut
  • Henning Müller
  • Muhamed Barakovic
  • Lester Melie-Garcia
  • Meritxell Bach Cuadra

INTRODUCTION: Over the past few years, the deep learning community has developed and validated a plethora of tools for lesion detection and segmentation in Multiple Sclerosis (MS). However, there is an important gap between validating models technically and clinically. To this end, a six-step framework necessary for the development, validation, and integration of quantitative tools in the clinic was recently proposed under the name of the Quantitative Neuroradiology Initiative (QNI). AIMS: Investigate to what extent automatic tools in MS fulfill the QNI framework necessary to integrate automated detection and segmentation into the clinical neuroradiology workflow. METHODS: Adopting the systematic Cochrane literature review methodology, we screened and summarised published scientific articles that perform automatic MS lesions detection and segmentation. We categorised the retrieved studies based on their degree of fulfillment of QNI's six-steps, which include a tool's technical assessment, clinical validation, and integration. RESULTS: We found 156 studies; 146/156 (94%) fullfilled the first QNI step, 155/156 (99%) the second, 8/156 (5%) the third, 3/156 (2%) the fourth, 5/156 (3%) the fifth and only one the sixth. CONCLUSIONS: To date, little has been done to evaluate the clinical performance and the integration in the clinical workflow of available methods for MS lesion detection/segmentation. In addition, the socio-economic effects and the impact on patients' management of such tools remain almost unexplored.

AIIM Journal 2010 Journal Article

Fusing visual and clinical information for lung tissue classification in high-resolution computed tomography

  • Adrien Depeursinge
  • Daniel Racoceanu
  • Jimison Iavindrasana
  • Gilles Cohen
  • Alexandra Platon
  • Pierre-Alexandre Poletti
  • Henning Müller

Objective We investigate the influence of the clinical context of high-resolution computed tomography (HRCT) images of the chest on tissue classification. Methods and materials 2D regions of interest in HRCT axial slices from patients affected with an interstitial lung disease are automatically classified into five classes of lung tissue. Relevance of the clinical parameters is studied before fusing them with visual attributes. Two multimedia fusion techniques are compared: early versus late fusion. Early fusion concatenates features in one single vector, yielding a true multimedia feature space. Late fusion consisting of the combination of the probability outputs of two support vector machines. Results and conclusion The late fusion scheme allowed a maximum of 84% correct predictions of testing instances among the five classes of lung tissue. This represents a significant improvement of 10% compared to a pure visual-based classification. Moreover, the late fusion scheme showed high robustness to the number of clinical parameters used, which suggests that it is appropriate for mining clinical attributes with missing values in clinical routine.

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